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LOCUS XR_011419755 4046 bp RNA linear INV 09-DEC-2024 (LOC138913880), transcript variant X2, ncRNA. ACCESSION XR_011419755 VERSION XR_011419755.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4046 /organism="Drosophila takahashii" /mol_type="transcribed RNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4046 /gene="LOC138913880" /note="uncharacterized LOC138913880; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:138913880" ncRNA 1..4046 /ncRNA_class="lncRNA" /gene="LOC138913880" /product="uncharacterized lncRNA, transcript variant X2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:138913880" ORIGIN 1 cccaagtgcg ctgtatctgt tagaatgtct atctttgaag ttgaaaattg caaacgaagt 61 gaaattaaaa gtgatcggtt aaagttaact cgttaaacca gtgtttaggg gtgtttgtaa 121 gccaaatatt gaacaattgt aagtaaattt agctgtgggc cgtggcagcg ttcgcgaaaa 181 ttctgcagat actagaagcc aggggcgtag tttaaatgag ggatagcccc ccttttcgga 241 caagtggcag ccccagcccc caatggccgt cgttttttcg ccgaccgcat tcaatgtgcg 301 tagtcaccga agataagttg tagttacagg gcctctccgt taaattctta ttttttcaaa 361 atgaaaacaa tcactaaaaa cctaaaacac agctagctag atagtaaaaa cgtggatcca 421 ccgaatgtaa tacgttaaat tgcataattc gggttatttc accaacgcaa aagcggcgtg 481 taaaggaaaa tttatggaac ggcattgcca gcactgcaga aaattccaaa gaagccattt 541 agaatgcaaa cccaggcaca tatgcacaga agatacgagg aaatcgtgcc tgcagctgct 601 gcattccgaa aaccagaccg tagccttgag gactacgaac aataaacccc tgggaaccga 661 acccaaatgg cttatagggg ttggactggg ctcaggtagg cgagaaatcg aggaaaccga 721 ggctacattc ttgccaccgc cgctacggag atcatcagtc gtcggcggca tggcctagtg 781 gaaacttctt aggtgaaatc agtttagaga gtgacttaca cagcagaccc aacgcaacac 841 gaccgggatg tgttccatcg ggcagcggca acttcttctg ggcctcccca gccccaactt 901 agaatccaca cttctcccgc aatatctgtg accagtacca cacagcttca agtccagtaa 961 tcgtctccat tgaaccatca agctataaag aacgacagtg aaatcctcaa gcattatgag 1021 attctccgcc tgagctgcaa ttcttccggg tggcgtcgtc tttgaggcat cgagaagacg 1081 cggctgcctc gaagagcgtc tgcggtacga gtggtgcacc ttgtgcggcg gcaagcggag 1141 cggacgggcc catataaacc caaccctgca gtcctaggtt cagaccctat ggcccaaccg 1201 acacacaagg aggaggatca ctccccttgg tggaacgaaa tgaaacgaaa acgcttgcga 1261 tggaaaagtc tgaccggagc gaaagagcaa agaaccaaga aaatccccag agcgttcgca 1321 tggcgccact tgcgttccga gaagacgcgt acgcatacct ctatcggtcg caagtggcgg 1381 tacgcggatg cgagcgagac gacaatactg tagacaagga gagacggctc cctctctcca 1441 tccctctctc ttacgcgctg gccaggcgtt tgcatcgcaa gcgggcgagc gagacggcca 1501 tagggcggat tgcagggccc gaaagagagc ggtgaagcaa tataagccct ataaacacta 1561 aagaacgcat cgaaagatgt gtataactaa ggggcatccc tcggcgagct caaagcacaa 1621 accgcactca cgactagcgc tccgcactga agagaccagc caaatccgga agaattaatc 1681 ggccagatgt gtagaatcag gataaattac taactgccca ggcagctgta taaacccaac 1741 caaaaactat gaaagcaaga gctatgcgct cttttaaagc ccaaaaaagt gtcatcgtaa 1801 cgttcaccca cttcacagtc catcaagtcc atttctggtc tgcacaaaga gatattgtag 1861 tgtcttgatg gcctaaatat ttgcttatcc ttgaagttat cactgcccta ggaactcgtc 1921 agtattcagg gggattttac gaaccgggtt gctagatgta gggacctgta gaatcagaaa 1981 cagaatcaga tgccacgccg ccatttcact agatcccaaa gccacgaagc tacgcccaga 2041 agatactgcc tctgcatagg ttctcaatgt gagcaagaag gcccaaaatg gattcccatc 2101 ggctaaggga tatattacct attaattctc gtataatcca gcactgttga aaaactcaag 2161 ctgggccaca aaacgaactc atcaccacag ccacaaaata aatgggaaac aactcaagaa 2221 ttagcctagc tcaactattc cactgataaa tcataaaacc agtgcctaga aatcgcccaa 2281 gagcggcatt ttgcttttgc tttagttttt tacgttggtt ttcaactaac cgaaatattg 2341 cttgcagcca attaatcagt ttattagctg aaaaagccct taaattaact gccaggaggt 2401 gagtttttgt cttcgatcct tggaaagcgt taagtaggtg cccatctaga ggagacaggc 2461 caggtaaagc ctgtataaaa aacctataaa aaaaaacagt taaaaaaacc aatatggaaa 2521 tgctttacaa gcttgccaga agttaagcga aaaaagaaaa ctaaaaatgc gttgaaaaat 2581 gaacacgaag tgctcgagtt tatcgtgcgt tttgaaacgc aaaagaaata taaaaaagcg 2641 aattaaatgc tggtcaatcg tttgacctgc agtttatttg caaatgacca agaatattcg 2701 ctaaacttag gacaaagctt gtttaaaaaa aaacaaaatt ccttctactg ggcaccggca 2761 aagcgcttcc accggggaat taagcaaaag ctattattct attggccttg attattaacc 2821 tatttctatg ctgtgttctt tcagatgagt tttgaacaga gacgaaactt ggagcctcgc 2881 ggagccaaag ttttcaattg tttttcagtt tagattcgca ttcgaggcga tttctagcac 2941 tttttcaaaa tagcttccta aacattcgct ggctaatcct tgaacttgag cttccatttc 3001 cattcaaaag tcatcttcat cccgttggtg acttgcttga gccggaacat tgtgcttagt 3061 cccttacttc aggtcattag aaccactttt ctgaaaatgt ccttcggcct agggaacccc 3121 attgaagcta ttgctttctc ctgaacttga tatgcaagca ggtgcaaata gagcctacga 3181 agtccagtcc ttctcccact gaggccacag ccaagaagct acgccaaaca caagagaaga 3241 tattattaac cacactgtac ttaacctaac ttaactttca gatccgccct ggaggagatt 3301 ctgtttgttt ttgtccgttc gagaaactaa ccccttcttt tttcagaatt cccgatcagt 3361 cctgaagtcc agtttcccca tcgtttcatt tatgtgtgtt ttaccccagt aacttgagtt 3421 gctacaatcc caatccattc tttaccagct gtgcatgccc tctgctttca cataactcct 3481 aaaacccatt taaaacccta atcaccagac actactaatc tcagttcttg tttcggtgag 3541 cgcaactttg aaacgttttc cgaaacagga acaaagaaaa tatttaagaa ttgcgcagaa 3601 cataaatatc atgaacgctt ttgaaagcaa acgctttgat tacggttcaa aaagataact 3661 aaaaaaagag aaaaaagcaa agacacattt actaacaata ctaacaaagt atgaatactt 3721 gctggtcaac gttctacgca gttcttgaaa agatgtattc taaatgaaat aaacacacca 3781 aaaaaaaaga aaatgcaagt aaatgaaaaa tgtgtggaaa cgttatacga atcttcacca 3841 agggcccaaa gaattaaaag agtataaagg aaccgttata cgcctgagcc gattcacaaa 3901 gaaataaatg atatttattc tgtggagccc aacaatctga attctatgtg catttctttg 3961 agaatcggct tgggactcag gtgaaatatt aaatcttttc ttgaactgct aaattaaaca 4021 agataaataa actgagtgaa acacaa