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LOCUS XR_011419754 4062 bp RNA linear INV 09-DEC-2024 (LOC138913880), transcript variant X1, ncRNA. ACCESSION XR_011419754 VERSION XR_011419754.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4062 /organism="Drosophila takahashii" /mol_type="transcribed RNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4062 /gene="LOC138913880" /note="uncharacterized LOC138913880; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:138913880" ncRNA 1..4062 /ncRNA_class="lncRNA" /gene="LOC138913880" /product="uncharacterized lncRNA, transcript variant X1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:138913880" ORIGIN 1 cccaagtgcg ctgtatctgt tagaatgtct atctttgaag ttgaaaattg caaacgaagt 61 gaaattaaaa gtgatcggtt aaagttaact cgttaaacca gtgtttaggg gtgtttgtaa 121 gccaaatatt gaacaattgt aagtaaattt agctgtgggc cgtggcagcg ttcgcgaaaa 181 ttctgcagat actagaagcc aggggcgtag tttaaatgag ggatagcccc ccttttcgga 241 caagtggcag ccccagcccc caatggccgt cgttttttcg ccgaccgcat tcaatgtgcg 301 tagtcaccga agataagttg tagttacagg gcctctccgt taaattctta ttttttcaaa 361 atgaaaacaa tcactaaaaa cctaaaacac agctagctag atagtaaaaa cgtggatcca 421 ccgaatgtaa tacgttaaat tgcataattc gggttatttc accaacgcaa aagcggcgtg 481 taaaggaaaa tttatggaac ggcattgcca gcactgcaga aaattccaaa gaagccattt 541 agaatgcaaa cccaggcaca tatgcacaga agatacgagg aaatcgtgcc tgcagctgct 601 gcattccgaa aaccagaccg tagccttgag gactacgaac aataaacccc tgggaaccga 661 acccaaatgg cttatagggg ttggactggg ctcaggtagg cgagaaatcg aggaaaccga 721 ggctacattc ttgccaccgc cgctacggag atcatcagtc gtcggcggca tggcctagtg 781 gaaacttctt gtgaggaact cttctcaggt gaaatcagtt tagagagtga cttacacagc 841 agacccaacg caacacgacc gggatgtgtt ccatcgggca gcggcaactt cttctgggcc 901 tccccagccc caacttagaa tccacacttc tcccgcaata tctgtgacca gtaccacaca 961 gcttcaagtc cagtaatcgt ctccattgaa ccatcaagct ataaagaacg acagtgaaat 1021 cctcaagcat tatgagattc tccgcctgag ctgcaattct tccgggtggc gtcgtctttg 1081 aggcatcgag aagacgcggc tgcctcgaag agcgtctgcg gtacgagtgg tgcaccttgt 1141 gcggcggcaa gcggagcgga cgggcccata taaacccaac cctgcagtcc taggttcaga 1201 ccctatggcc caaccgacac acaaggagga ggatcactcc ccttggtgga acgaaatgaa 1261 acgaaaacgc ttgcgatgga aaagtctgac cggagcgaaa gagcaaagaa ccaagaaaat 1321 ccccagagcg ttcgcatggc gccacttgcg ttccgagaag acgcgtacgc atacctctat 1381 cggtcgcaag tggcggtacg cggatgcgag cgagacgaca atactgtaga caaggagaga 1441 cggctccctc tctccatccc tctctcttac gcgctggcca ggcgtttgca tcgcaagcgg 1501 gcgagcgaga cggccatagg gcggattgca gggcccgaaa gagagcggtg aagcaatata 1561 agccctataa acactaaaga acgcatcgaa agatgtgtat aactaagggg catccctcgg 1621 cgagctcaaa gcacaaaccg cactcacgac tagcgctccg cactgaagag accagccaaa 1681 tccggaagaa ttaatcggcc agatgtgtag aatcaggata aattactaac tgcccaggca 1741 gctgtataaa cccaaccaaa aactatgaaa gcaagagcta tgcgctcttt taaagcccaa 1801 aaaagtgtca tcgtaacgtt cacccacttc acagtccatc aagtccattt ctggtctgca 1861 caaagagata ttgtagtgtc ttgatggcct aaatatttgc ttatccttga agttatcact 1921 gccctaggaa ctcgtcagta ttcaggggga ttttacgaac cgggttgcta gatgtaggga 1981 cctgtagaat cagaaacaga atcagatgcc acgccgccat ttcactagat cccaaagcca 2041 cgaagctacg cccagaagat actgcctctg cataggttct caatgtgagc aagaaggccc 2101 aaaatggatt cccatcggct aagggatata ttacctatta attctcgtat aatccagcac 2161 tgttgaaaaa ctcaagctgg gccacaaaac gaactcatca ccacagccac aaaataaatg 2221 ggaaacaact caagaattag cctagctcaa ctattccact gataaatcat aaaaccagtg 2281 cctagaaatc gcccaagagc ggcattttgc ttttgcttta gttttttacg ttggttttca 2341 actaaccgaa atattgcttg cagccaatta atcagtttat tagctgaaaa agcccttaaa 2401 ttaactgcca ggaggtgagt ttttgtcttc gatccttgga aagcgttaag taggtgccca 2461 tctagaggag acaggccagg taaagcctgt ataaaaaacc tataaaaaaa aacagttaaa 2521 aaaaccaata tggaaatgct ttacaagctt gccagaagtt aagcgaaaaa agaaaactaa 2581 aaatgcgttg aaaaatgaac acgaagtgct cgagtttatc gtgcgttttg aaacgcaaaa 2641 gaaatataaa aaagcgaatt aaatgctggt caatcgtttg acctgcagtt tatttgcaaa 2701 tgaccaagaa tattcgctaa acttaggaca aagcttgttt aaaaaaaaac aaaattcctt 2761 ctactgggca ccggcaaagc gcttccaccg gggaattaag caaaagctat tattctattg 2821 gccttgatta ttaacctatt tctatgctgt gttctttcag atgagttttg aacagagacg 2881 aaacttggag cctcgcggag ccaaagtttt caattgtttt tcagtttaga ttcgcattcg 2941 aggcgatttc tagcactttt tcaaaatagc ttcctaaaca ttcgctggct aatccttgaa 3001 cttgagcttc catttccatt caaaagtcat cttcatcccg ttggtgactt gcttgagccg 3061 gaacattgtg cttagtccct tacttcaggt cattagaacc acttttctga aaatgtcctt 3121 cggcctaggg aaccccattg aagctattgc tttctcctga acttgatatg caagcaggtg 3181 caaatagagc ctacgaagtc cagtccttct cccactgagg ccacagccaa gaagctacgc 3241 caaacacaag agaagatatt attaaccaca ctgtacttaa cctaacttaa ctttcagatc 3301 cgccctggag gagattctgt ttgtttttgt ccgttcgaga aactaacccc ttcttttttc 3361 agaattcccg atcagtcctg aagtccagtt tccccatcgt ttcatttatg tgtgttttac 3421 cccagtaact tgagttgcta caatcccaat ccattcttta ccagctgtgc atgccctctg 3481 ctttcacata actcctaaaa cccatttaaa accctaatca ccagacacta ctaatctcag 3541 ttcttgtttc ggtgagcgca actttgaaac gttttccgaa acaggaacaa agaaaatatt 3601 taagaattgc gcagaacata aatatcatga acgcttttga aagcaaacgc tttgattacg 3661 gttcaaaaag ataactaaaa aaagagaaaa aagcaaagac acatttacta acaatactaa 3721 caaagtatga atacttgctg gtcaacgttc tacgcagttc ttgaaaagat gtattctaaa 3781 tgaaataaac acaccaaaaa aaaagaaaat gcaagtaaat gaaaaatgtg tggaaacgtt 3841 atacgaatct tcaccaaggg cccaaagaat taaaagagta taaaggaacc gttatacgcc 3901 tgagccgatt cacaaagaaa taaatgatat ttattctgtg gagcccaaca atctgaattc 3961 tatgtgcatt tctttgagaa tcggcttggg actcaggtga aatattaaat cttttcttga 4021 actgctaaat taaacaagat aaataaactg agtgaaacac aa