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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419729            1415 bp    RNA     linear   INV 09-DEC-2024
            (LOC138913860), transcript variant X2, ncRNA.
ACCESSION   XR_011419729
VERSION     XR_011419729.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1415
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1415
                     /gene="LOC138913860"
                     /note="uncharacterized LOC138913860; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:138913860"
     ncRNA           1..1415
                     /ncRNA_class="lncRNA"
                     /gene="LOC138913860"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:138913860"
ORIGIN      
        1 actattcttg gaattcttct gctttcaatt gtagttttta aatgaaaaca ttgaatattt
       61 ttgttcgtta caataatgga ctgcaccaaa gtattgtgaa agtagaaagc acaaaagatt
      121 atttacgaga tgaaaaggga gcccacccaa atctacgaag aaatgtgata caaccaattc
      181 tacctatata tttattaaag ttcgctgttt ggagagtctc ataggaatca ttataaagct
      241 ctttccaaag aggttctgat ctacatggat gtgcttactt ttggatcagg ataattctgt
      301 acatatgtaa aagttcctga aatggcttga taaaattgaa aaatcacttt gagacactaa
      361 atatatcttt tataaatata tttataaata tttcacccaa gtgacctgcc tccgtttccg
      421 cgacaccacc agcaccaccc gcaccaccca caccaccgtg acaaggcacg cttcgctttc
      481 cgcgcctttg catgcgacga gtttgtcact gtgatttatg cctgagaggg ttgcaccacc
      541 gcttcgccag gagggggagt gggcggtggg tggtgtgagg agagtggggt cgatgaatag
      601 tcaaaaaagc gagtacacat agccgtgcaa gtggaataga agccgcagtc aaaaaggcag
      661 ccgagcagag gaagctgagc cagtcaggcg gtcggtggca ggcgtcaaca ggatgccaag
      721 gacgaaggac gaaggaggag ggtggcacag gaggagaaag atgagcaaga tgagcggagg
      781 gttgcgatta cagtgtcatt ggcagcgtcg acggcgtcac tttgcgcact gccaagtgca
      841 gccaccagaa ccgaatccaa tatacaaatc agagccaccc cactcagcca cccatccaca
      901 tcccctcttc ccacaaaaaa caaaaaaaaa aagaaagagg aaaactaaac caaaagcaaa
      961 accaagggcg aatccacgcc caacagctac aattttcaat tttatttcat ttttatggct
     1021 tttggaaatt aaattgttgt cagcgcatac aaaattaacc agagcgttgg gatttgcata
     1081 gccagccgag aggtgtgacc tctaaccccg tagcagcacc catcaccacc cactcagcca
     1141 tatagaaata cagccagcga tgttattgtt atagccgcca tatcacccgc tgggcttgcg
     1201 gtctttaaca tttagcaaaa catttgattg ccatcaggat aatcccaaag gggaaggccc
     1261 aaactgcgag gatgtggggc tgggcttgcc aggagctcgc tgattgcccg ggaggagtat
     1321 cgcatcgcat ctccataaag ttctcagccg agggccttaa ataaatgttt atattaaaca
     1381 aaagcctgac actaaaaagg gttcctaaaa aagta