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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419665            1113 bp    RNA     linear   INV 09-DEC-2024
            (LOC108059197), transcript variant X11, ncRNA.
ACCESSION   XR_011419665
VERSION     XR_011419665.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1113
                     /gene="LOC108059197"
                     /note="uncharacterized LOC108059197; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:108059197"
     ncRNA           1..1113
                     /ncRNA_class="lncRNA"
                     /gene="LOC108059197"
                     /product="uncharacterized lncRNA, transcript variant X11"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:108059197"
ORIGIN      
        1 tttcgattta cacgttcgcc ctggacgatc gccgtttaac tgtgaaaagg aatggaattt
       61 ctatcggaat cgagattttt cctttctccc acattcgtca aaaagtgtaa tcgtgtgtat
      121 agaaagagat ggatgatgtg agagaaagag agatggcgat gttagtcaaa ttccaaacgc
      181 attctgagct tatcgcatat tgaattcctg gcatgcacga caattcgatg acggcactca
      241 cacacccgca cccacctgcc tccccctgta agaaaatacc attaaaatat gaaaatataa
      301 aggaaaattc atctgtgaaa attcgaaaga gctcataaaa attcgatgga agttgtaggg
      361 tgctggaaaa agtaccgttc tcaagtcgaa gcagaagccg tcatcgttga tacataaact
      421 accaaatatc gcatcgaaaa tgtatagatg cactcacaaa acaaataccg ccttgatgat
      481 aataaaagca atgatgatga tgtcgctaag aatgtctgtc cgactgcctg ccatcccata
      541 aatttatgct aaaatttaaa ttttctttca agtagttgac cgaccgaccg accgatcgag
      601 agaaaggtca ccacgaatgg tgtcgcggtg acaaaatgcc acataaatat tacacgaagc
      661 cccactctga taagcgaatg tcactcttat taaaaataaa agaaggcaaa tgcccaacaa
      721 aggcgaaccg atgccgatac ccgaaaatgg aaatggaaat gattctcccg gtgcattgac
      781 ttgggcagag ggacaagtgt aatggacacg ctcggttccc atccacatca cgatgaactt
      841 gaagtttcgc actcgcttga ttgagttgtt cttcttcttg cactctggtc agctggcatg
      901 gctcagcaga tcggactagc tgtactttat atataacgat tcgaccatgg gaactactgg
      961 ccgctcttca tcatcttcct catcatccgc ggcattgccg gcaaaatgtg acagacagca
     1021 tccattaccc taacgataat tggccagggt atgtgattcc cagattttca ttgagagttt
     1081 agcgaaaaag aaacggaata tgacagtccc cta