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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419663            1285 bp    RNA     linear   INV 09-DEC-2024
            (LOC108059197), transcript variant X9, ncRNA.
ACCESSION   XR_011419663
VERSION     XR_011419663.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1285
                     /gene="LOC108059197"
                     /note="uncharacterized LOC108059197; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:108059197"
     ncRNA           1..1285
                     /ncRNA_class="lncRNA"
                     /gene="LOC108059197"
                     /product="uncharacterized lncRNA, transcript variant X9"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:108059197"
ORIGIN      
        1 ttactgtagt tgtttcgatc aagatcaagg ctttttgcca atgtgtgttc gatggcgtgg
       61 gtgtgtgtgt gtgttgttgc tgtttttctt ggcccttttg cgagtgtgta attgcaaacg
      121 tatgtttgta tgtatgcacc tgtgtaagtg caattacaaa tgccaatcac gcattcgcta
      181 tctcgctctg ttggtcatgg ccaagttttg cagtcgctgc gcagtcggcg tctcataaat
      241 tctaactgtc aaatgtgcac acatgcagct aaacatgcat aatattacat atagaaagag
      301 atggatgatg tgagagaaag agagatggcg atgttagtca aattccaaac gcattctgag
      361 cttatcgcat attgaattcc tggcatgcac gacaattcga tgacggcact cacacacccg
      421 cacccacctg cctccccctg taagaaaata ccattaaaat atgaaaatat aaaggaaaat
      481 tcatctgtga aaattcgaaa gagctcataa aaattcgatg gaagttgtag ggtgctggaa
      541 aaagtaccgt tctcaagtcg aagcagaagc cgtcatcgtt gatacataaa ctaccaaata
      601 tcgcatcgaa aatgtataga tgcactcaca aaacaaatac cgccttgatg ataataaaag
      661 caatgatgat gatgtcgcta agaatgtctg tccgactgcc tgccatccca taaatttatg
      721 ctaaaattta aattttcttt caagtagttg accgaccgac cgaccgatcg agagaaaggt
      781 caccacgaat ggtgtcgcgg tgacaaaatg ccacataaat attacacgaa gccccactct
      841 gataagcgaa tgtcactctt attaaaaata aaagaaggca aatgcccaac aaaggcgaac
      901 cgatgccgat acccgaaaat ggaaatggaa atgattctcc cggtgcattg acttgggcag
      961 agggacaagt gtaatggaca cgctcggttc ccatccacat cacgatgaac ttgaagtttc
     1021 gcactcgctt gattgagttg ttcttcttct tgcactctgg tcagctggca tggctcagca
     1081 gatcggacta gctgtacttt atatataacg attcgaccat gggaactact ggccgctctt
     1141 catcatcttc ctcatcatcc gcggcattgc cggcaaaatg tgacagacag catccattac
     1201 cctaacgata attggccagg gtatgtgatt cccagatttt cattgagagt ttagcgaaaa
     1261 agaaacggaa tatgacagtc cccta