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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_011419643            2756 bp    RNA     linear   INV 09-DEC-2024
            (LOC138913803), transcript variant X2, ncRNA.
ACCESSION   XR_011419643
VERSION     XR_011419643.1
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2756
                     /gene="LOC138913803"
                     /note="uncharacterized LOC138913803; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:138913803"
     ncRNA           1..2756
                     /ncRNA_class="lncRNA"
                     /gene="LOC138913803"
                     /product="uncharacterized lncRNA, transcript variant X2"
                     /db_xref="GeneID:138913803"
ORIGIN      
        1 tcttcccgat ttcgattctg tctgatcgcc ctcttacttt cttcgtggcc cactgagata
       61 acgacgtgca agtttttcac tttcaggata cccacgatta aaaattgatg aaaaaaaaag
      121 atgcactcgg atccggaaga accgttagct ttcgcctttc ctggcgtctt tcgattgttt
      181 ctgcggatgg ggggatgcaa ggaggatcgc gaaacactgg aagggttgga aagctgagcg
      241 atcgcgtcgc aggaccgtta ccgttaagcg gcgcacgctg aattgaagcg ctgccagcgg
      301 tcggttgaca ctttttgtta acggtgacga tcggcggcgg tgacgttgct ccgtcgcttc
      361 tcgattcccg taaccgttct gatttaaatg gaacgctgct ccaagctcac gtctgtttcc
      421 agtctctgcc ggcgccggcg tcgcggccga cgtcgctgcc cagctaaccg ctatttttgt
      481 ttctgtgcct cttttttttt ttagctttcc gtcgattttg gcaatttcca gttttcaatt
      541 tccagccgag cttgagtctt cttcccgtct caaagggata ttccagcgag tgaagagaga
      601 agaaggagcg ttaccgttat gtcactttcg aagcgaataa cggcgaatct tagcaaaacg
      661 aaatcttcga gtgcggcact caagaaatca gagcggaaaa gctgagaact cagaaccgca
      721 cggcaaacga acgcggcatt aagtaattgt cccacctcct ttaactgccg atcggtgtgt
      781 ttattcgtgt gtttgtatta aagtacaccg tgtgtgatac gtgtgtgtga tctctaatcc
      841 agtgctcact cactttgagc tcttcgcgag ctccaaaaaa taagacaggc cgaagtcact
      901 caagaaatgt gtgaatgttg tttttgtttt tgtttttttt tttttttaga gtgtgcggct
      961 ggcgggttgg ggagccccac ccccatccct gcactaacta aaccgaacta aactaaatca
     1021 agtcgaaacg gcgatcgaca aacggcaact attcgccccc aaaacaccca ccacccaccc
     1081 cccaccagtc gcaaaaaaga gatactgtgt agtaaccaac ggaacacggg ccagcacagt
     1141 ggaacaaata ttacccagta ccgaaactat ttgagttctc aagatcttca aaaaaaaatc
     1201 tccttaaata tatccttcag aacaaatgaa ttctgcagag tctatgaatc actaagtaat
     1261 aatcaaaagt aatattgata gcatttcata aatgtttcct atgaaccata aaatatagcc
     1321 gtgacatgcc catttagttt acgtcaaaac atcgatttta tacaacccaa actaataata
     1381 tctgtagaaa aaaattggca cctattgggt atttcttgtt acagtaatct taattgccaa
     1441 taaattgatt ggagaagatc caaaccatat aattcaaaag aaacttttca aagttaatct
     1501 tgattttcta ccaaacggaa aataagggtt tagctaagga aattatataa ataaaaaagc
     1561 actgaaactt caaaaaagtt ataaatcaaa gttttaccgt attaagagat ctgtagatca
     1621 cagacaccta aatctttatc agaattgtat tatttgagca agcatcactt atctcaaccc
     1681 actgtgtgct ctgttttgat cgtcagcatg gccaccgacc tttttggaaa atatgtacga
     1741 aacatggggc cagactccca acccagagtg ggcgccactg ccacgcccac cgaccaaccg
     1801 tcaagcccag aaaacacacc taaacgtgcg ttgtcaaaaa aaaaaaaaaa acaaaaaaaa
     1861 aataaagaaa aaagaaaaca accaaagcga ccacaatcgc aaccaacgta aataatttgt
     1921 ctacggattt tagtgcttta cgacgggcac tagccgagcg caaacttaga tcgtcaaacg
     1981 gcagacgagc caccgcaatg gccgctccac acccacccac tgaaccacat ggtagcaccc
     2041 tacccaccct catcccacct tgatcttggg ggcttacacc aactgatcct gtcataatga
     2101 aagaaaggac ctcgtggccc actgtgcata cctgcaaatg gacgacggaa ccgaatcgaa
     2161 tcggattctc gagaggtgag agccgtgagc cgtttaagtg caactcagaa cgctgacact
     2221 tgacgatcag agttgagtta tcgccccgct ttttgctcac gctccatatt tcgtattctc
     2281 cgctgatcga tttggatttg gcgactgcgg ctgcggaaga gcggagaaag ctcaagagag
     2341 agcgcggaga gatggagata gccgtagccc ccggggcatc gaatcgacgg ggacaatgat
     2401 agtattgata agaagtgctt tacactggat cttctcagct gtctgaatgc cgaaaattgg
     2461 acaaaaacaa tttaaaaatt ttaaattcta acaattttcg attaggtcct gatggagaat
     2521 ggttttgtta gagcttgaat tgttaccaat ttttcttgta ttaatcacag gtatgccatt
     2581 ttgcccaccg tgcgccgacg cagcttagcc cagcgatcgt aaaaagcaca actcacgatc
     2641 atcggagatc tatagttttc agagcaaaaa gtggagcagt gctgaccatg actcctagga
     2701 ttttatttta tgtacattgt acaatgacat atgtatactt taaatattga ccttta