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LOCUS XR_011419592 7512 bp RNA linear INV 09-DEC-2024 transcript variant X8, misc_RNA. ACCESSION XR_011419592 VERSION XR_011419592.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7512 /organism="Drosophila takahashii" /mol_type="transcribed RNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7512 /gene="rdgB" /note="retinal degeneration B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108054546" misc_RNA 1..7512 /gene="rdgB" /product="retinal degeneration B, transcript variant X8" /db_xref="GeneID:108054546" ORIGIN 1 ttaaatgtca catacacagg cagaagccat agcaactagc acacctacat ctctagacct 61 gtacaaaacc cgccccactg cccccggaaa aatatctaca gaccgctgac taacctcgcc 121 tcgttttccg ttttccattt tccgatttcc tcattccgtc caggtcatag acgacgcctc 181 gccccgcacc caagcacccc gaaagtgtcg gacgacagcg tcgcctccac gtcatccagc 241 catgaccagc ggcaatcgat gattgccatt ccctcagcca acgagagcca atagaggcag 301 ccggaaagga gcggatccgt cggaagagcc cgccactcgc cactcgccat tcgaacgaac 361 ccatcaacag ccgcaggagg ggccttcgct tccctgcttc aactgccctt tgaaagccaa 421 ggactaaagt cacacggtca cgggtcaaca tgctgatcaa ggagtaccgc attccactgc 481 ccctcaccgt ggaggagtac cgcatcgccc agctctacat gatagcgaaa aagagtcgcg 541 aggagagtca tggcgagggc agtggggttg agattatcat caatgagccc tataaggacg 601 gtcccggggg aaatggtcag tacacgaaga agatctacca tgtgggcaat catctgccag 661 gctggatcaa gagtcttttg cccaagagcg ctttaaccgt ggaggaggag gcctggaatg 721 cctatcccta taccaggact cgctacacct gcccatttgt ggagaagttc tcgctggaca 781 ttgagacata ctattacccg gataatggct accaggataa tgtctttcag ttgtccggaa 841 gcgatctgcg taaccgcatc gtggatgtaa ttgacattgt gaaggaccag ctgtggggcg 901 gcgattatgt caaggaggag gatcccaagc acttcgtgtc ggacaagacg ggccgcggac 961 ctctgggcga ggactggctg gaggagtact ggcgcgaggt gaagggcaag aagcagccga 1021 cgccccgcaa catgtccctg atgaccgcct acaagatctg ccgcgtggag ttccgctact 1081 ggggcatgca gacgaagctg gaaaagttca tccacgacgt ggcgctgcgc aagatgatgc 1141 tgcgcgccca tcggcaggcg tgggcgtggc aggacgagtg gttcggcctg accatcgagg 1201 atatccgcga gctggagcgc cagacccaac tggccctggc caagaaaatg ggcggtggcg 1261 aggagtgcag cgacgatagc acttcggaac cctatgtgag cacggcggtc accgccgcct 1321 ccacaacggg cagcgaacgg aagaaatccg ctccggccgt gccgcccatc gtaacccaac 1381 agccgcccag cgcggaggcc agttcggatg aggaggaggg cgaggaggag gacgacgacg 1441 aggacgagaa cgatgccatt ggcacgggcg tcgatctgtc cgccaatcaa ggtggatccg 1501 cccaaaggtc ccgatcccag agcatccaga tggcgcagaa gggcaaattc gggtccaagg 1561 gggccctcca ttcgcccgtg ggatctgccc acagctttga tctccaggtg gcaaactggc 1621 gcatggagcg attggaagtg gactccaaat ccaattcgga tgaagaattc ttcgactgtt 1681 tggacaccaa tgagacgaac tcgctggcca agtggagctc cctggagctg ctgggcgagg 1741 gcgacgacag tccgccgccg catggcggac cctccagcgc tgcctccgtg ggcggacgag 1801 gcagctcgcg gcaggaggac agcatcttca accaggactt cctgatgcgc gtggcctcgg 1861 agcgtgggaa caagcggcaa ttgcgctcct cggccagcgt ggatcgcagc cacgactcgt 1921 cgccgccggg ctcgccgagc acaccgtcat gccccacaac catcctgatc ctggtggtcc 1981 atgcgggcag tgttttggat gcggccagcg agctgacggc caagaaatcg gatgtcacca 2041 cctttcgcgg ctccttcgag gcggtgatgc gtcagcacta cccgagcctg ctcacccatg 2101 tgaccatcaa gatggtgccg tgtccctcga tctgcaccga cgccctgggc atcctctcca 2161 gcctgagtcc gtactccttc gatgcctccc cctcggcggc ggatataccg aatatagccg 2221 acgttccgat cggtgcgata cctctcctct cagttgcttc gccggaattc catgagacgg 2281 tcaacaagac ggtggccgct gcgaatatag tgtaccacga attcttgaag tcggaggagg 2341 gccacggatt ctccggacag attgtgatgc tgggcgattc gatgggctcg ctgctggcct 2401 acgaggcgct ctgccgatcg aatggcagcc agccgggcac agcctcgaat tccggcggag 2461 atgcggcggc cagcaatgtg aatacccaca atccgctggg cgctcgccat tcgcgtttgg 2521 acgacgacga gcggttcatc gaggccgatc tggatgccaa gcggctgctg gtggccccgt 2581 cgccgcgtcg tcgccgttcc agctcctcga gcgactcgcg ggccagcaaa ctggactttg 2641 aggtctgcga cttcttcatg ttcggctcgc cgctgtcggt ggtgctggcg gcgcggaaac 2701 tgcacgatgc caaggccgct ctggcccggc cgaactgcca tcaggtgtac aatctgttcc 2761 atccaaccga tccgattgcc tcgcgtctgg agccgctgct cagcgcgaga ttctccattt 2821 tggcgccggt taatgtgccc cggtatgcca agtatccgct gggaaatggt cagccattgc 2881 atttattgga ggtgattcag tcgcatccgc agcactttaa cgatggcaac aacctgttgg 2941 ccggaagacg actctcggat gcctcgatgc agagcacgat atcgggtctg attgagaatg 3001 tctcgcttag tacgatccat gcccttcaaa acaaatggtg gggcaccaag cgcttggact 3061 acgccctcta ttgccccgag ggactgagca actttccggc ccacgccttg ccgcatctct 3121 tccacgccag ctactgggag agcccggatg tgattgcgtt catcctgcgg cagattggca 3181 aattcgaggg catacccttt gtgggctcca atgacgacaa ggacaacgcc tcctttcacc 3241 caggacagcc gcgcgagaag tggatcaaga agcgcacctc ggtgaagctg aaaaatgttg 3301 cggccaatca tcgggccaac gatgtgatcg tccaggaggg cagggagcag cggctgaatg 3361 cccgcttcat gtacggaccc ctcgacatga tcacgctgca cggcgagaag gtggatgtgc 3421 acatcatgaa ggatccgccg gcgggcgaat ggacattcct cagcaccgag gtgacggaca 3481 agaacggtcg catctcgtac agcattccgg atcagttgtc cctcggctat ggcatctatc 3541 cggtcaagat ggtcgtccgc ggcgatcaca cctcggtgga ttgctacatg gcggtggtgc 3601 cgcctttgac cgagtgcgtg gtcttcagca tcgatggctc cttcaccgcc tcgatgtcgg 3661 tgacgggcag ggatcccaaa gttcgggccg gcgccgtcga cgtctgccgg cactggcagg 3721 agctgggcta cctgctgatc tacatcaccg gacgacccga catgcagcag cagcgcgtcg 3781 tctcctggct gagccagcac aacttccccc acggcctcat ctcgttcgcc gacggcctgt 3841 ccaccgatcc gctgggccac aagacggcct atctcaacaa cctggtgcag aaccacggaa 3901 tctcaatcac cgccgcctac ggcagcagca aggacatcag tgtctacacg aatgtgggca 3961 tgcgaaccga tcagatcttc atcgtgggca aggtcggcaa gaaactgcag tccaatgcca 4021 ctgtgctgag cgatggctac gccgcccact tggccggttt gcaggcggtg ggtggttcgc 4081 gtccagccaa gggcaatgcc cgcatggtca tcccccgcgg atgcttcaat cttcccggcc 4141 agacggcgaa tccgcgacgc agaaggctgc atgaacaagc aacgaatgaa aattaaattg 4201 caagttaaac aaacaataaa aaattgttta gagccataaa accacaacaa taaaagcatc 4261 ttgtaaacat atagaagcaa aaaaaaacac caaaacaata cagacaattg atgttagttt 4321 tagtgttcta gaatattccc catactcccc acaccttttt ttgagttcct ttgttaagta 4381 ttttgaagca tacctagctg agcattttat tgattgattg attggtgttg tgaagaaaaa 4441 gaaaccaaat ttataagaaa aaccacccat aatagaggtg ctgaaacgtc gataaatatc 4501 gatcctagaa agttatccac ctctaaacca cacttagagc caaaattcaa ctctttctca 4561 acgtgttaac tctgtctctc tttttccaaa accaaaaaaa attgcttgac aaaaaaatac 4621 accacacaca ccatacacac acgcacacac tgccatcgac cttgttatcg ataaacagca 4681 acgagacggg actttcatca cccatacgca gtggttacct gaagcgcaag acctacctga 4741 gccaccacta gagcaacaga gatgcagcta cttagattga tccatcagac aaaatgaaat 4801 caaatcaaat caaatatccc ccaagaaccc aaatagaact cccttcgaaa tagaaaacag 4861 aaatatagcc agaggactac agcatcgatg cctccatatg ccacatctgt gtatatacca 4921 tatatatcta tatatattta tatactatgc gcgatatatt gaaagttcaa tggtgtaata 4981 tatatcaaaa acaaaaacca aatttgcaaa tgagaaaaaa caattgtaca acatttaacc 5041 aaagtcaaat gtgtcacgcg gtacctggaa agaaagactg tttcctcctg ttgtttgatg 5101 gtttttcaaa ccacttaaag cataaaaaaa cattgaaaac tacacgaaac aaaagccgat 5161 tgtaaagcta tatactaaat acaattataa aaaagatata tacaaggata tattcagaat 5221 atagaaccgt ttaacatatg caagcgaaca aagttcaaga aaccacgtga ggtacaacaa 5281 ctgaaggaca aactaatgga accgaagatc tcccgatcga taaggataca actaagacaa 5341 ggacgagcgg aaagcgttgc aaaatcaaaa ggcaaattta atgcatttct tgacaaaaca 5401 accacaacaa actcttacga aaagtataaa ttaacggctt ccgtaaacca aacaaaaacc 5461 taaaactaaa aatatatatc tatatgtatg cgtgtaaaat tgacaaaaaa acggttctta 5521 agaagaaact aaaatcttca tgaaattgaa tacaatctat tacctggccc cagaaatttg 5581 aaatctccat aattgtgata gtctttcgct accaaaagtt aatttaaaaa gaaaaggaaa 5641 aacagcaaaa tatatattta tctctactaa aattgttatt cgaaaagaaa ctattggata 5701 ttgtgtaaaa aatgtataac aaaaaaccaa aaaacccgat tttgtgatac caaaactaaa 5761 accgaaactg aaaccaaatt tgagttcgag atgagatcaa gccgaaagct cctcgtgtta 5821 gaaacctata caaacaactc aaggcgacct gaagatgtaa cgggcatgga atctgaccca 5881 tatattacta tatatatata tatgcataac ccagttatgt gctgtccaca caagttaact 5941 aaaaactctc acacaactcg aaagcaaaat aaatctcagc tataaaccag ataacactga 6001 attagaggta caaaagggac cttaaaacga gaaaaatata tatgtaatct gttcgatctg 6061 tttaggttta cctaagccaa agttggttaa ctatcgagta gtcgagatac gccagtaaga 6121 tacttcctaa actgaaatat aaacgcaaat tgaagagttt aaaccgatag ttgtaacgag 6181 aacagagtaa ttgtatgtaa agataaagat atatatatat atacctacac tatatactgt 6241 atatttatct agcgcaacta cattaaggac ttttgaagct tgctaactga caaaaagtgt 6301 tccgatcaaa gtattgtccg gctatacgtt cctctctcct ccatttgagt cgactttcaa 6361 ctctctttta ttttcctgta gcgagtattc aactaaaaac cgatggaaga tccactagaa 6421 tttaagatca atctctgcct aagaagagtt tatcctatat aagtacgtag caagttggtt 6481 cagcgtgagg tattaaggta ttaaataaca ctccagatac tcgtagagtc caaaggttta 6541 tgtctgtcta attagttggt aaattaatgg catttctgta ttattatttt atactgttct 6601 tggaaacttt tgaatctctt ccccaccaaa aaatatgaaa acttttcttt cttcagggtc 6661 agaagtttaa gactttacac aatgggttat acttgattgt tctatggaat cctaaaattt 6721 catattaatc cattgatttg ttcctgattt atcgtagcaa tttgtacact tccacatcct 6781 acagttccat ttatctccaa agtaagaact accaaagcca ataaaaagtt gagctaaatt 6841 gtattgatat tttgagaacc caccatttag attaagctaa agtccccact aatgcagaga 6901 atataatcaa agaacaaaac actctaagca aaaacaatga aaaggtttaa aatactacaa 6961 gcaaataggt aaatatatgt ccgtgtggct atgtattcta attgttaagt gcaaaagtcc 7021 aggaataacg aatacgaatt cagatggtaa acaattataa agagagcgag gcgaacaaaa 7081 tatggaatta tttattgaca acaaaatcta caagtcgaag aactaaaaaa caaaaatgag 7141 gagcaagcca aatgcaatct atttacaaaa tcctacaaaa acctaaggcg aggcagaaat 7201 gacaaacaga agagttaaag atagctgatc cgacaaaaat aaagatatat atatatgtat 7261 atgaacacca gagattttta agccaattgt tgaaattgga ctatgacaaa taacaaaagt 7321 aaacaaattg aaatatggca gtaacagata tttttcgatg taagctgttt gttagaaaat 7381 gatcgagttt cagcgaaatg atatgtggcc aaaaccagtt aatcatttca cagaaaatcg 7441 aaaacaaagc ggttcatgaa aagataacaa aaaaaaaaaa cctaaacaaa aacaaatgtt 7501 ctatttgatg tt