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LOCUS XR_011419590 7033 bp RNA linear INV 09-DEC-2024 transcript variant X3, misc_RNA. ACCESSION XR_011419590 VERSION XR_011419590.1 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7033 /organism="Drosophila takahashii" /mol_type="transcribed RNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7033 /gene="rdgB" /note="retinal degeneration B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108054546" misc_RNA 1..7033 /gene="rdgB" /product="retinal degeneration B, transcript variant X3" /db_xref="GeneID:108054546" ORIGIN 1 ttaaatgtca catacacagg cagaagccat agcaactagc acacctacat ctctagacct 61 gtacaaaacc cgccccactg cccccggaaa aatatctaca gaccgctgac taacctcgcc 121 tcgttttccg ttttccattt tccgatttcc tcattccgtc caggtcatag acgacgcctc 181 gccccgcacc caagcacccc gaaagtgtcg gacgacagcg tcgcctccac gtcatccagc 241 catgaccagc ggcaatcgat gattgccatt ccctcagcca acgagagcca atagaggcag 301 ccggaaagga gcggatccgt cggaagagcc cgccactcgc cactcgccat tcgaacgaac 361 ccatcaacag ccgcaggagg ggccttcgct tccctgcttc aactgccctt tgaaagccaa 421 ggactaaagt cacacggtca cgggtcaaca tgctgatcaa ggagtaccgc attccactgc 481 ccctcaccgt ggaggagtac cgcatcgccc agctctacat gatagcgaaa aagagtcgcg 541 aggagagtca tggcgagggc agtggggttg agattatcat caatgagccc tataaggacg 601 gtcccggggg aaatggtcag tacacgaaga agatctacca tgtgggcaat catctgccag 661 gctggatcaa gagtcttttg cccaagagcg ctttaaccgt ggaggaggag gcctggaatg 721 cctatcccta taccaggact cgctacacct gcccatttgt ggagaagttc tcgctggaca 781 ttgagacata ctattacccg gataatggct accaggataa tgtctttcag ttgtccggaa 841 gcgatctgcg taaccgcatc gtggatgtaa ttgacattgt gaaggaccag ctgtggggcg 901 gcgattatgt caaggaggag gatcccaagc acttcgtgtc ggacaagacg ggccgcggac 961 ctctgggcga ggactggctg gaggagtact ggcgcgaggt gaagggcaag aagcagccga 1021 cgccccgcaa catgtccctg atgaccgcct acaagatctg ccgcgtggag ttccgctact 1081 ggggcatgca gacgaagctg gaaaagttca tccacgacgt ggcgctgcgc aagatgatgc 1141 tgcgcgccca tcggcaggcg tgggcgtggc aggacgagtg gttcggcctg accatcgagg 1201 atatccgcga gctggagcgc cagacccaac tggccctggc caagaaaatg ggcggtggcg 1261 aggagtgcag cgacgatagc acttcggaac cctatgtgag cacggcggtc accgccgcct 1321 ccacaacggg cagcgaacgg aagaaatccg ctccggccgt gccgcccatc gtaacccaac 1381 agccgcccag cgcggaggcc agttcggatg aggaggaggg cgaggaggag gacgacgacg 1441 aggacgagaa cgatgccatt ggcacgggcg tcgatctgtc cgccaatcaa ggtggatccg 1501 cccaaaggtc ccgatcccag agcatccaga tggcgcagaa gggcaaattc gggtccaagg 1561 gggccctcca ttcgcccgtg ggatctgccc acagctttga tctccagtcc aaaaagccgc 1621 atgcaaagac agcgccacgc agacatgtgg caaactggcg catggagcga ttggaagtgg 1681 actccaaatc caattcggat gaagaattct tcgactgttt ggacaccaat gagacgaact 1741 cgctggccaa gtggagctcc ctggagctgc tgggcgaggg cgacgacagt ccgccgccgc 1801 atggcggacc ctccagcgct gcctccgtgg gcggacgagg cagctcgcgg caggaggaca 1861 gcatcttcaa ccaggacttc ctgatgcgcg tggcctcgga gcgtgggaac aagcggcaat 1921 tgcgctcctc ggccagcgtg gatcgcagcc acgactcgtc gccgccgggc tcgccgagca 1981 caccgtcatg ccccacaacc atcctgatcc tggtggtcca tgcgggcagt gttttggatg 2041 cggccagcga gctgacggcc aagaaatcgg atgtcaccac ctttcgcggc tccttcgagg 2101 cggtgatgcg tcagcactac ccgagcctgc tcacccatgt gaccatcaag atggtgccgt 2161 gtccctcgat ctgcaccgac gccctgggca tcctctccag cctgagtccg tactccttcg 2221 atgcctcccc ctcggcggcg gatataccga atatagccga cgttccgatc ggtgcgatac 2281 ctctcctctc agttgcttcg ccggaattcc atgagacggt caacaagacg gtggccgctg 2341 cgaatatagt gtaccacgaa ttcttgaagt cggaggaggg ccacggattc tccggacaga 2401 ttgtgatgct gggcgattcg atgggctcgc tgctggccta cgaggcgctc tgccgatcga 2461 atggcagcca gccgggcaca gcctcgaatt ccggcggaga tgcggcggcc agcaatgtga 2521 atacccacaa tccgctgggc gctcgccatt cgcgtttgga cgacgacgag cggttcatcg 2581 aggccgatct ggatgccaag cggctgctgg tggccccgtc gccgcgtcgt cgccgttcca 2641 gctcctcgag cgactcgcgg gccagcaaac tggactttga ggtctgcgac ttcttcatgt 2701 tcggctcgcc gctgtcggtg gtgctggcgg cgcggaaact gcacgatgcc aaggccgctc 2761 tggcccggcc gaactgccat caggtgtaca atctgttcca tccaaccgat ccgattgcct 2821 cgcgtctgga gccgctgctc agcgcgagat tctccatttt ggcgccggtt aatgtgcccc 2881 ggtatgccaa gtatccgctg ggaaatggtc agccattgca tttattggag gtgattcagt 2941 cgcatccgca gcactttaac gatggcaaca acctgttggc cggaagacga ctctcggatg 3001 cctcgatgca gagcacgata tcgggtctga ttgagaatgt ctcgcttagt acgatccatg 3061 cccttcaaaa caaatggtgg ggcaccaagc gcttggacta cgccctctat tgccccgagg 3121 gactgagcaa ctttccggcc cacgccttgc cgcatctctt ccacgccagc tactgggaga 3181 gcccggatgt gattgcgttc atcctgcggc agattggcaa attcgagggc ataccctttg 3241 tgggctccaa tgacgacaag gacaacgcct cctttcaccc aggacagccg cgcgagaagt 3301 ggatcaagaa gcgcacctcg gtgaagctga aaaatgttgc ggccaatcat cgggccaacg 3361 atgtgatcgt ccaggagggc agggagcagc ggctgaatgc ccgcttcatg tacggacccc 3421 tcgacatgat cacgctgcac ggcgagaagg tggatgtgca catcatgaag gatccgccgg 3481 cgggcgaatg gacattcctc agcaccgagg tgacggacaa gaacggtcgc atctcgtaca 3541 gcattccgga tcagttgtcc ctcggctatg gcatctatcc ggtcaagatg gtcgtccgcg 3601 gcgatcacac ctcggtggat tgctacatgg cggtggtgcc gcctttgacc gagtgcgtgg 3661 tcttcagcat cgatggctcc ttcaccgcct cgatgtcggt gacgggcagg gatcccaaag 3721 ttcgggccgg cgccgtcgac gtctgccggc actggcagga gctgggctac ctgctgatct 3781 acatcaccgg acgacccgac atgcagcagc agcgcgtcgt ctcctggctg agccagcaca 3841 acttccccca cggcctcatc tcgttcgccg acggcctgtc caccgatccg ctgggccaca 3901 agacggccta tctcaacaac ctggtgcaga accacggaat ctcaatcacc gccgcctacg 3961 gcagcagcaa ggacatcagt gtctacacga atgtgggcat gcgaaccgat cagatcttca 4021 tcgtgggcaa ggtcggcaag aaactgcagt ccaatgccac tgtgctgagc gatggctacg 4081 ccgcccactt ggccggtttg caggcggtgg gtggttcgcg tccagccaag ggcaatgccc 4141 gcatggtcat cccccgcgga tgcttcaatc ttcccggcca gacggcgaat ccgcgacgca 4201 gaagcaacga gacgggactt tcatcaccca tacgcagtgg ttacctgaag cgcaagacct 4261 acctgagcca ccactagagc aacagagatg cagctactta gattgatcca tcagacaaaa 4321 tgaaatcaaa tcaaatcaaa tatcccccaa gaacccaaat agaactccct tcgaaataga 4381 aaacagaaat atagccagag gactacagca tcgatgcctc catatgccac atctgtgtat 4441 ataccatata tatctatata tatttatata ctatgcgcga tatattgaaa gttcaatggt 4501 gtaatatata tcaaaaacaa aaaccaaatt tgcaaatgag aaaaaacaat tgtacaacat 4561 ttaaccaaag tcaaatgtgt cacgcggtac ctggaaagaa agactgtttc ctcctgttgt 4621 ttgatggttt ttcaaaccac ttaaagcata aaaaaacatt gaaaactaca cgaaacaaaa 4681 gccgattgta aagctatata ctaaatacaa ttataaaaaa gatatataca aggatatatt 4741 cagaatatag aaccgtttaa catatgcaag cgaacaaagt tcaagaaacc acgtgaggta 4801 caacaactga aggacaaact aatggaaccg aagatctccc gatcgataag gatacaacta 4861 agacaaggac gagcggaaag cgttgcaaaa tcaaaaggca aatttaatgc atttcttgac 4921 aaaacaacca caacaaactc ttacgaaaag tataaattaa cggcttccgt aaaccaaaca 4981 aaaacctaaa actaaaaata tatatctata tgtatgcgtg taaaattgac aaaaaaacgg 5041 ttcttaagaa gaaactaaaa tcttcatgaa attgaataca atctattacc tggccccaga 5101 aatttgaaat ctccataatt gtgatagtct ttcgctacca aaagttaatt taaaaagaaa 5161 aggaaaaaca gcaaaatata tatttatctc tactaaaatt gttattcgaa aagaaactat 5221 tggatattgt gtaaaaaatg tataacaaaa aaccaaaaaa cccgattttg tgataccaaa 5281 actaaaaccg aaactgaaac caaatttgag ttcgagatga gatcaagccg aaagctcctc 5341 gtgttagaaa cctatacaaa caactcaagg cgacctgaag atgtaacggg catggaatct 5401 gacccatata ttactatata tatatatatg cataacccag ttatgtgctg tccacacaag 5461 ttaactaaaa actctcacac aactcgaaag caaaataaat ctcagctata aaccagataa 5521 cactgaatta gaggtacaaa agggacctta aaacgagaaa aatatatatg taatctgttc 5581 gatctgttta ggtttaccta agccaaagtt ggttaactat cgagtagtcg agatacgcca 5641 gtaagatact tcctaaactg aaatataaac gcaaattgaa gagtttaaac cgatagttgt 5701 aacgagaaca gagtaattgt atgtaaagat aaagatatat atatatatac ctacactata 5761 tactgtatat ttatctagcg caactacatt aaggactttt gaagcttgct aactgacaaa 5821 aagtgttccg atcaaagtat tgtccggcta tacgttcctc tctcctccat ttgagtcgac 5881 tttcaactct cttttatttt cctgtagcga gtattcaact aaaaaccgat ggaagatcca 5941 ctagaattta agatcaatct ctgcctaaga agagtttatc ctatataagt acgtagcaag 6001 ttggttcagc gtgaggtatt aaggtattaa ataacactcc agatactcgt agagtccaaa 6061 ggtttatgtc tgtctaatta gttggtaaat taatggcatt tctgtattat tattttatac 6121 tgttcttgga aacttttgaa tctcttcccc accaaaaaat atgaaaactt ttctttcttc 6181 agggtcagaa gtttaagact ttacacaatg ggttatactt gattgttcta tggaatccta 6241 aaatttcata ttaatccatt gatttgttcc tgatttatcg tagcaatttg tacacttcca 6301 catcctacag ttccatttat ctccaaagta agaactacca aagccaataa aaagttgagc 6361 taaattgtat tgatattttg agaacccacc atttagatta agctaaagtc cccactaatg 6421 cagagaatat aatcaaagaa caaaacactc taagcaaaaa caatgaaaag gtttaaaata 6481 ctacaagcaa ataggtaaat atatgtccgt gtggctatgt attctaattg ttaagtgcaa 6541 aagtccagga ataacgaata cgaattcaga tggtaaacaa ttataaagag agcgaggcga 6601 acaaaatatg gaattattta ttgacaacaa aatctacaag tcgaagaact aaaaaacaaa 6661 aatgaggagc aagccaaatg caatctattt acaaaatcct acaaaaacct aaggcgaggc 6721 agaaatgaca aacagaagag ttaaagatag ctgatccgac aaaaataaag atatatatat 6781 atgtatatga acaccagaga tttttaagcc aattgttgaa attggactat gacaaataac 6841 aaaagtaaac aaattgaaat atggcagtaa cagatatttt tcgatgtaag ctgtttgtta 6901 gaaaatgatc gagtttcagc gaaatgatat gtggccaaaa ccagttaatc atttcacaga 6961 aaatcgaaaa caaagcggtt catgaaaaga taacaaaaaa aaaaaaccta aacaaaaaca 7021 aatgttctat ttg