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PREDICTED: Drosophila takahashii Neuroglian (Nrg), transcript


LOCUS       XR_006412371            5529 bp    RNA     linear   INV 09-DEC-2024
            variant X1, misc_RNA.
ACCESSION   XR_006412371
VERSION     XR_006412371.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XR_006412371.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5529
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..5529
                     /gene="Nrg"
                     /note="Neuroglian; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 6 Proteins"
                     /db_xref="GeneID:108055215"
     misc_RNA        1..5529
                     /gene="Nrg"
                     /product="Neuroglian, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:108055215"
ORIGIN      
        1 cgatgttttt gaaagtatcg cgcaaagtat cgcccaaatg tacaccccag gccaaattcc
       61 catccgttct cattcaattt tttaatttcg actcgcgctg ctgtgctccg ttgttgcaac
      121 agaacagcag aaagtaataa aagctcggct cgcatgcaat tttcattagt gggaaaattg
      181 cttgatattt aagaggcaac cgaggaacaa accgaatcaa cagcagcagc agcaggcaga
      241 cagacacaca cattccaaac taaattaata ataggaaaaa aataaaagtt aaagccaaaa
      301 caaaccaaaa ccaaacgaaa cacaatcgag ggcgcgagcg gagtgccaga aacgacgaaa
      361 atgtggcggc agtcaacgat actggccgcg ttattagtgg ctcttataac gggctgtgca
      421 gcagtcaaaa gcaactcccc accaagaatc accaaacaac cggcacccgg agaactgctc
      481 ttcaaagtag cgcaacagaa taaggaaagt gacaatccat ttattatcga atgcgaagcc
      541 gatgcacaac ccgaaccaga atatagttgg gtgaagaatg gcaagaagtt cgactggcag
      601 gcgtacgaca accggatgct gcgacagcct ggccgcggca ccctggtgat caccataccc
      661 aaggacgagg atcgcggcca ctaccagtgc tttgcgtcca acgaattcgg aacggcgacc
      721 tcgaactcgg tgtatgtgcg caaggcggag ctgaatgcct tcaaggacga gatgcccaag
      781 actttggagg cggtggaggg cgagcccttc atgctcaagt gtgccgcccc cgatggcttt
      841 cccagtccga ccgtcaactg gatgatccag gagtccatcg acggcagcat caagtcgatc
      901 aacaactcgc gcatgaccct cgatcccgag ggcaatctct ggttctcgaa cgtgacccgc
      961 gaggatgcca gctcggactt ctactacgcc tgctcggcca cctccgtttt ccgcagcgag
     1021 tacaagatcg gcaacaaggt gctgctcgac gtcaagcaga tgggcgtgag tgcctcgcag
     1081 aacaaacacc agcccgtccg ccagtatgtt tcgcgtcgcc agtcgctggc gctgcgcggc
     1141 aagcgcatgg aactcttctg catctacggc ggcactccgc tgccgcagac cgtctggagc
     1201 aaggatggcc agcggataca gtggagcgac aggatcaccc agggacacta cggcaagtcg
     1261 ctggtcatca ggcagacgaa cttcgacgat gccggcacct acacctgcga cgtctcgaac
     1321 ggcgtcggca atgcccagtc cttctcgatc atcctcaatg tcaactcggt gccgtatttc
     1381 accaaggaac ccgacttcca gaccgccgcc gaggacgagg aggtggtctt cgagtgccgc
     1441 gccgccggtg tgcccgagcc gaagatcagt tggattcaca atggcaagcc catcgagcag
     1501 acgccaccga atccccggcg aaccgtcacg gacaacacga tccggatcgt taatctggtc
     1561 aagggcgata cgggtaacta cggctgcaac gccaccaact cgctgggcta cgtctacaag
     1621 gatgtctatc tgaatgtcca ggccgagccg ccaaccattg aagttccccc ctcggacgtc
     1681 tccagtgtgg atgggcgaaa catcacgatc aagtgccgcg tgaagggatc ccccaagccg
     1741 ctggtcaagt ggctgagggc cagcaactgg ctgaccggcg gtcgctacaa tgttcaggct
     1801 aacggcgatc tggagatcca ggacgtgacc ttctcggatg ccggcaagta cacgtgctat
     1861 gcgcagaaca agttcggtga gatccaggcg gacgggtcgc tggtggtcaa ggagcacacg
     1921 cgcatcaccc aggagccgca gaactacgag gtggccgccg gacagtcggc cacattccgc
     1981 tgcaacgagg cgcacgacga tacgctggag atcgagatcg attggtggaa ggacgggcag
     2041 tcgattgact ttgaggcgca gccgcgtttc gtgaagacca acgacaattc gctgaccatt
     2101 gccaagacca tggagctgga ttcgggcgag tatacgtgtg tggcgaggac gcgactggat
     2161 gaggcaacgg ccagggccaa tttgattgtc caggatgtgc cgaatgcccc aaaactaacg
     2221 ggcatcacct gccaggcgga caaggcggag attcagtggg agccgcaggg cgacaaccgc
     2281 tcgcccattc tgcactacac cattcagttt aatacgagct tcacgcccgc ctcgtgggat
     2341 gccgcgtacg agaaggtgcc caatacggac tcctccttcg ttgtccaaat gtcgccgtgg
     2401 gccaactaca cgttccgtgt gatcgccttc aacaagatcg gtgcctcgcc gccgtcggcg
     2461 cacagcgaca gctgcaccac ccagccggat gtgcccttca agaatcccga caatgtcgtc
     2521 ggccagggca ccgagccgaa taatctggtc atctcgtgga ctcccatgcc cgagatcgag
     2581 cacaatgcgc ccaatttcca ttactacgtg agctggaaac gcgacattcc ggcggcgtcg
     2641 tgggagaata acaacatctt tgactggcga cagaacaaca ttgtgatcgc cgatcagccg
     2701 acgttcgtca agtatctgat caaggtggtg gccatcaacg acaagggcga atcgaatgtg
     2761 gccgccgagg aggtggtcgg ctattccggc gaggatcgtc ccctggacgc gcccaccaac
     2821 tttacgatgc gacagatcac ctcgtcgacc agcggctata tggcctggac accggtgagc
     2881 gaggagtcgg tgaggggtca cttcaagggc tacaagatcc agacgtggac ggagaacgag
     2941 ggcgaggagg gtctgcggga gatccatgtg aagggcgata cgcacaacgc cctggtcacc
     3001 cagtttaagc ccgactcgaa gaactttgcc cgcatcctgg cctacaacgg tcgcttcaat
     3061 gggccgccca gtgcggtcat cgatttcgat acacccgagg gtgtgccgtc gccggtccag
     3121 ggattggatg cctatccact gggctcctcg gccttcatgc tgcactggaa gaagccgctg
     3181 tatcccaatg gcaagctcac cggctacaag atctactacg aggaggtcaa ggagagctat
     3241 gtgggcgagc ggcgggagta cgatccccat atcaccgatc ccagggtcac gcgcatgaag
     3301 atggccggtc tgaagcccaa ctccaagtat cgcatctcca tcacggccac cacgaaaatg
     3361 ggcgagggat ctgagcacta catcgagaag acgacgctga aggacgccat caatgtggcc
     3421 ccggccacgc cctcattctc ctgggagcaa ctgccctccg acaatggact ggccaagttc
     3481 cgcatcaact ggcagccaag tcaggaaggt cacccgggca ctcacttctt caccatgtac
     3541 aggatcaagg gcgaaaccca gtggctgcgc aaggacgagg agaagaactc cgactaccag
     3601 gaggttagcg gcctggatcc agacaccgcc tacgagttcc gcgtggtctc cgtcgatggg
     3661 cacttcaata cggagagtgc cacgcaggag atcgacacga acaccgtcga gggaccgatc
     3721 atacagccca acgagacggt ggcgaatgca ggttggttca tcggcatgat gctggccctg
     3781 gccttcatca ttatcctgtt catcatcatc tgcattatcc ggcgcaatcg gggcggcaag
     3841 tacgacgttc acgatcggga gctggccaac ggccggcggg attatcccga agagggcggc
     3901 ttccacgagt actcgcaacc gttggataac aagagcgctg gtcgccaatc cgtgagttca
     3961 gcgaacaaac ccggcgtgga aagcgacacc gattcgatgg ccgaatacgg tgatggcgac
     4021 acagctgtgg ccacagccgc tgctcgcgtc gctgccgcag cccgcaacaa gtcgacgtcc
     4081 tcccaacaac aacagcagca gcagcaacaa cagcaaatac cgtcgctacc tcagtcgccg
     4141 tcgacgtcgg cttcaaccgt tccattgctc caaccgctct cctcggcctc ctcctcaccc
     4201 tcacccactt ccacctccaa cccctccccc gccccgccct cctacgaact gtgcatggcg
     4261 gatgctgagc cccgcaaggc ctaaaagaga gtgtggggaa aagaaagaga gagctctcca
     4321 tttctctccc cagtccgccg ttgttgctat ccaatcagtc aggcatgaac gaagatggat
     4381 cctttattgg ccaatatgga cgcaaaggac tttgatttaa ttagtaagca gcgcgccgca
     4441 acagcaactc aaaaaatatc gaaaccgagc cctttacccc aaaaatcaac aagaccaaac
     4501 accatcacag cagagaaaga aaaacacgaa tggaaccatt caagaaatac tacccagcca
     4561 tgaaatgggt atcaactaat ttttattcga ttaagtgcaa agaaccacga ttattttaaa
     4621 gtatatataa aattagacgt tttatatata gctattaaaa ttaaaaaatt aaaaatatgt
     4681 aaaaaacaaa cgcaaatcaa tactgccaaa caacatgaac aacacaacag caacaacaac
     4741 aacaacaacg aggatgcagc aaaaaggcta ttaacacaat aaaagtcttc atcggaagaa
     4801 gtagtaatcg aaaaagaaaa tgcatgcgaa tcaatgataa aggagaacca tatatttttc
     4861 cggaaataat cgggcagcag ctgcgtgtaa ttttttttgt taagaaattt aagaaactat
     4921 gaggaaaatg aagctcgctt ttaaaatctc tatattgcgc acacgtctac ctgtcccact
     4981 ctgtcccccg gcactctgta tatctctgtc ccgctctctc ccctcttcta cttgtaatgc
     5041 atatatattt ataaatataa agcgtaaata agttataatt taataatttt tttataaaaa
     5101 caacactcga atgtaaaatc tccgttttag attggccgta aatcgtaaat cgaaatgaaa
     5161 cccctttagc ttacatgttt actactttat ttaagcctat tgtgtgtatt ttgtttttat
     5221 ttctttattt tattttttta gttcgtgtaa tgactttgaa ttttttgctt taattttgga
     5281 cagtgaaaca gcgttttaaa atgtatacac cacagatgta tgtacaagtt tccctgtttg
     5341 ttttccttgt ttgtaccggg aacagcgaca aaacgaagtc tattttttca gtgtatttaa
     5401 tattaaagaa tgaatgaaga gaacatcatg attatgaaaa tataattttt tttacatatg
     5461 ttgatgtact ttcgcatatt aaattagaaa gaaaatcaaa tgaaataaag aaaaccgaat
     5521 aataaacaa