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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_006412339            1104 bp    RNA     linear   INV 09-DEC-2024
            (LOC108059197), transcript variant X4, ncRNA.
ACCESSION   XR_006412339
VERSION     XR_006412339.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XR_006412339.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1104
                     /gene="LOC108059197"
                     /note="uncharacterized LOC108059197; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:108059197"
     ncRNA           1..1104
                     /ncRNA_class="lncRNA"
                     /gene="LOC108059197"
                     /product="uncharacterized lncRNA, transcript variant X4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:108059197"
ORIGIN      
        1 tttgttcttc tttattattt atcaatcgcc cattgcaagt gcaagtgcaa agacaaaacg
       61 ggcaaagaca aggttagcta ctaaaagccg tcttggcttt aaatcaaaac aagtgcaata
      121 aagccaaagc caaaagcagg cgagccagca acaacactgc aaagtaatat agaaagagat
      181 ggatgatgtg agagaaagag agatggcgat gttagtcaaa ttccaaacgc attctgagct
      241 tatcgcatat tgaattcctg gcatgcacga caattcgatg acggcactca cacacccgca
      301 cccacctgcc tccccctgta agaaaatacc attaaaatat gaaaatataa aggaaaattc
      361 atctgtgaaa attcgaaaga gctcataaaa attcgatgga agttgtaggg tgctggaaaa
      421 agtaccgttc tcaagtcgaa gcagaagccg tcatcgttga tacataaact accaaatatc
      481 gcatcgaaaa tgtatagatg cactcacaaa acaaataccg ccttgatgat aataaaagca
      541 atgatgatga tgtcgctaag aattagttga ccgaccgacc gaccgatcga gagaaaggtc
      601 accacgaatg gtgtcgcggt gacaaaatgc cacataaata ttacacgaag ccccactctg
      661 ataagcgaat gtcactctta ttaaaaataa aagaaggcaa atgcccaaca aaggcgaacc
      721 gatgccgata cccgaaaatg gaaatggaaa tgattctccc ggtgcattga cttgggcaga
      781 gggacaagtg taatggacac gctcggttcc catccacatc acgatgaact tgaagtttcg
      841 cactcgcttg attgagttgt tcttcttctt gcactctggt cagctggcat ggctcagcag
      901 atcggactag ctgtacttta tatataacga ttcgaccatg ggaactactg gccgctcttc
      961 atcatcttcc tcatcatccg cggcattgcc ggcaaaatgt gacagacagc atccattacc
     1021 ctaacgataa ttggccaggg tatgtgattc ccagattttc attgagagtt tagcgaaaaa
     1081 gaaacggaat atgacagtcc ccta