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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_006412338            1163 bp    RNA     linear   INV 09-DEC-2024
            (LOC108059197), transcript variant X1, ncRNA.
ACCESSION   XR_006412338
VERSION     XR_006412338.2
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XR_006412338.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1163
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1163
                     /gene="LOC108059197"
                     /note="uncharacterized LOC108059197; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:108059197"
     ncRNA           1..1163
                     /ncRNA_class="lncRNA"
                     /gene="LOC108059197"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:108059197"
ORIGIN      
        1 tttgttcttc tttattattt atcaatcgcc cattgcaagt gcaagtgcaa agacaaaacg
       61 ggcaaagaca aggttagcta ctaaaagccg tcttggcttt aaatcaaaac aagtgcaata
      121 aagccaaagc caaaagcagg cgagccagca acaacactgc aaagtaatat agaaagagat
      181 ggatgatgtg agagaaagag agatggcgat gttagtcaaa ttccaaacgc attctgagct
      241 tatcgcatat tgaattcctg gcatgcacga caattcgatg acggcactca cacacccgca
      301 cccacctgcc tccccctgta agaaaatacc attaaaatat gaaaatataa aggaaaattc
      361 atctgtgaaa attcgaaaga gctcataaaa attcgatgga agttgtaggg tgctggaaaa
      421 agtaccgttc tcaagtcgaa gcagaagccg tcatcgttga tacataaact accaaatatc
      481 gcatcgaaaa tgtatagatg cactcacaaa acaaataccg ccttgatgat aataaaagca
      541 atgatgatga tgtcgctaag aatgtctgtc cgactgcctg ccatcccata aatttatgct
      601 aaaatttaaa ttttctttca agtagttgac cgaccgaccg accgatcgag agaaaggtca
      661 ccacgaatgg tgtcgcggtg acaaaatgcc acataaatat tacacgaagc cccactctga
      721 taagcgaatg tcactcttat taaaaataaa agaaggcaaa tgcccaacaa aggcgaaccg
      781 atgccgatac ccgaaaatgg aaatggaaat gattctcccg gtgcattgac ttgggcagag
      841 ggacaagtgt aatggacacg ctcggttccc atccacatca cgatgaactt gaagtttcgc
      901 actcgcttga ttgagttgtt cttcttcttg cactctggtc agctggcatg gctcagcaga
      961 tcggactagc tgtactttat atataacgat tcgaccatgg gaactactgg ccgctcttca
     1021 tcatcttcct catcatccgc ggcattgccg gcaaaatgtg acagacagca tccattaccc
     1081 taacgataat tggccagggt atgtgattcc cagattttca ttgagagttt agcgaaaaag
     1141 aaacggaata tgacagtccc cta