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PREDICTED: Drosophila takahashii uncharacterized lncRNA


LOCUS       XR_001769954             909 bp    RNA     linear   INV 09-DEC-2024
            (LOC108058391), transcript variant X1, ncRNA.
ACCESSION   XR_001769954
VERSION     XR_001769954.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XR_001769954.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..909
                     /organism="Drosophila takahashii"
                     /mol_type="transcribed RNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..909
                     /gene="LOC108058391"
                     /note="uncharacterized LOC108058391; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:108058391"
     ncRNA           1..909
                     /ncRNA_class="lncRNA"
                     /gene="LOC108058391"
                     /product="uncharacterized lncRNA, transcript variant X1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
                     /db_xref="GeneID:108058391"
ORIGIN      
        1 atgcctattg agaacgaggt attttatatt tctaaattat ttgttaacct ggtaggcttt
       61 gacttcaact gtcagctctg tgatatagtt attttatttt ctaaaaatca gtcttgctat
      121 tgtgagtgtc cgggcaacat cagcagtgtt ccaaaaaaaa aacgacaatt atactaactt
      181 aaaaaaaaat atatgagaaa aattacaatc aaaaacagct acacagttcc aaattttaaa
      241 caaagtgtgt cgggttaagt aacaaggttg ctcgaaaaac gcgtgctctt gctttttctt
      301 ggctgttcgt ttgtgcttgc tcccggtttt cccactttcc ccgggaggta tgacgacccc
      361 acaacgcgac aaagatttag agacgatccg catgtgcttg gagatccaca caataaaaaa
      421 caaactaaac catcgatttg atggccaaaa tgctgaagaa cttcgagttg gcggaaggcc
      481 tcttccaagg tttaagacgg caactcttta gtccaaaaaa caaaggaagt ccaagtcaac
      541 cgtagaaagg gatcccgtct ttggaaaact cctcaactcg acagtggaga tcaggcctat
      601 tggattgtgg ataacaccct gcgcttgcac atttccataa gcttaggcct tagtggtacg
      661 ctactttaag cgcccaggac ttcttggtca ctttgagggc taagaagccc ttgggctcag
      721 ggtggcgtac aactaaggct agagattgtg gaaatatcgc aggcatgtcc gaggacatga
      781 tggatgtgga cgagatgtgc aagatctaaa aggcttggag gactgttaaa tccatcaaat
      841 caaaaatcaa ggaccgttta ataaaaatac aacataatta aggactaaat aaattagagt
      901 gaaactatt