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LOCUS XR_001769809 3031 bp RNA linear INV 09-DEC-2024 variant X3, misc_RNA. ACCESSION XR_001769809 VERSION XR_001769809.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XR_001769809.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3031 /organism="Drosophila takahashii" /mol_type="transcribed RNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3031 /gene="Ubqn" /note="ubiquilin; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108055220" misc_RNA 1..3031 /gene="Ubqn" /product="ubiquilin, transcript variant X3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:108055220" ORIGIN 1 gtatgtgtgc gagcgaacgg gcgtgcgtgt gtgtgtgtgt gagtgagaaa gtgacgaatt 61 acttttcatc aaatgggaaa taatttagtt tgaaaacacg tatcccagcc agagcagccg 121 acgaaaaatt gcagttgtga cacaatttgg acaccccccc acccgaaaca cgagctaaat 181 cggcgcaggc aaagaccaga gacacggcga aggcgacaag aagagcagcg aaatggcgga 241 aggcggcagc aagcgcatca acgtggttgt gaaaacgcca aaggacaaga agacggtcga 301 ggttgacgaa gattctggaa taaaagagtt caaaattctg gtggcacaaa agttcgaggc 361 ggagcccgag cagctggtgc tcatcttcgc cgggaagatc atgaaggaca cggacaccct 421 gaagatgcac aacatcaagg acaacttgac ggttcatctg gtgatcaagg cgccgacgcg 481 caacaacgag gcgcccgccc gccagccggc ggatgtccgc cagacgccct ttggcctgaa 541 tcaattcggt ggcctggcgg gcatggaggc actgggtgcc ggatcgaata ccttcatgga 601 tctgcaggca cgcatgcaga acgagctgct caataatggc gatatgctgc gatctctgat 661 ggacaatccg ctggtgcagc agatgatgaa caatccggac acgatgcgcc agctgatcac 721 gtcgaatccg cagatgcagg atctgatgca gcgcaacccg gagatctcgc acatgctcaa 781 caatccggac ctgctgcgcc agacaatgga gctggcccgc aatccctcga tgctgcagga 841 gctgatgcgt tcgcacgatc gggccatgtc caatctggag tccgtgccgg gcggatatag 901 tgcgctgcag cggatctacc gcgacatcca ggagccgatg atgaacgccg ccaccgagtc 961 ctttggccgc aatccctttg ccggcctggt ggacggcggc ctgggcgctg ggatcaatcc 1021 gcagcagggc accgagaacc gcaacccgtt gccgaatccc tggggcggcg gtggaggtgc 1081 caattccggg acaaatggca caggcaccgc caatcgtact ggagatctgc cgcccaacaa 1141 tgtcctcaac acgccggcca tgcgcagcct gctccagcag atggccgaca atccggccat 1201 gatgcagaac ctcctgaacg ccccctacac gcgttccatg atggagtcca tgtcgcagga 1261 tccggacatg gcatcgcgcc tgctgagcag cagccccctg ctgtccaata atcccgctct 1321 gcaggatcag gtgcgccaga tgatgccgca gttcatggca cagatgcaga atcccgaggt 1381 gcagaacatg ctgaccaatc cggacgccat gaacgccatc ctgcagatcc agcagggcat 1441 ggagcagctg cgcagcgcgg ccccgggact cgttggcact ttgggcattc cgccgccgcc 1501 gccaggagtt ggcaacacgg atgcggatcc ggccagcggt gatggtggaa gcaccaccaa 1561 caatgcctca ccaaacgccg ctaatcccgt gcccagcttg gcaccgggtg gcggtccgaa 1621 tgcgcagctc ttcaacgact tcatgatgcg catgctcaac gggatgtcga acaacgcaga 1681 cggcacacag ccgcccgagg tgcgctacca gtcgcagctg gagcagctgg cggcgatggg 1741 cttcggcaac cgggatgcca atttgcaggc cctgatcgcc acctttgggg acatcaatgc 1801 ggctgtggag cgacttctgt ccctcaacca gctgtccctg agttaacaac gctaagccat 1861 ttccaaactg tacacaacct gtctatatat ctaccaacta catctatata tctaacacta 1921 tagccctgga gaacgcgaat gatacgatga taacgattga tgatgatgat gatgagaaag 1981 gggggaaaca cacacacaaa aattccatgc tgattgctta ttccccttat taagccggaa 2041 atatcttgaa tccttcatga ccatacaaca cacaaaacac acaacaaaaa taggagcctg 2101 gagaacggag agatattacg gatggatatg atagaagagc atagatagag atcgcatacc 2161 aaagtgtcgg cacttgcgta gttgatatca ttattttttt ttaattattt actttttcga 2221 gggctctaaa gcggaaaccc caattgaata tgcgccacga agcatatata ttatatatct 2281 ccagacaaaa cacacaattc cccaacagag acaacctaga atttcaataa atttccaaca 2341 gttgtgtgct tgaggaagaa acgaacgagg ttctaaggat actgggtttt ttttttcatt 2401 tggctccccc atccgattcc ccctcccttt tctcgccaag tgctacagta gatatcggct 2461 atatgcaatg gaatatgtat acaagcaata cgagtagtca aaatggttat cgattcgtta 2521 atacacctaa gagtaatctc ccagcgttat ctaaccttaa gccatccgtt taagagaatc 2581 aaaatgtata aagttgcgca ctagcggtat ctactgtagg tccacaagtg tgtacatagg 2641 gtatatagta ggtacatcca aatattccat ggtgttgaca aaaaaaaaga cgtgaaagct 2701 atttaaaatt cctatttaaa actctaagca tataaccgac tctttgggaa cttcttttgg 2761 atcttctggg gttccgatcc ctcaattcac acacacacac tataatataa aagcgtatga 2821 gttcaatgta taccctgtaa gtactattac catatatgcg aggagtatgc aggtgagcca 2881 acttgaacgg gggaattggg tgggtgggca gaaactggag ctggaccgat acgtttattt 2941 gtttagtgaa ggaagaagga agctaagtaa ttaaatgtaa atgatcacat gttttaaaac 3001 agtaataaag ctactttggt tttagattat a