Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_070074611 1720 aa linear INV 09-DEC-2024 ACCESSION XP_070074611 VERSION XP_070074611.1 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_070218510.1 KEYWORDS RefSeq; includes ab initio. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 100% of CDS bases ##RefSeq-Attributes-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1720 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..1720 /product="uncharacterized protein" /calculated_mol_wt=194730 Region 131..269 /region_name="DUF1759" /note="Protein of unknown function (DUF1759); pfam03564" /db_xref="CDD:281552" Region 296..>395 /region_name="AIR1" /note="Arginine methyltransferase-interacting protein, contains RING Zn-finger [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]; COG5082" /db_xref="CDD:227414" Region 447..607 /region_name="pepsin_retropepsin_like" /note="Cellular and retroviral pepsin-like aspartate proteases; cl11403" /db_xref="CDD:472175" Site order(464,466,468,491..493) /site_type="active" /note="inhibitor binding site [active]" /db_xref="CDD:133136" Site 464..466 /site_type="active" /note="catalytic motif [active]" /db_xref="CDD:133136" Site 464 /site_type="active" /note="Catalytic residue [active]" /db_xref="CDD:133136" Site order(491..494,498..501) /site_type="active" /note="Active site flap [active]" /db_xref="CDD:133136" Region 729..940 /region_name="RT_pepA17" /note="Reverse transcriptase (RTs) in retrotransposons. This subfamily represents the RT domain of a multifunctional enzyme. C-terminal to the RT domain is a domain homologous to aspartic proteinases (corresponding to Merops family A17) encoded by...; cd01644" /db_xref="CDD:238822" Site order(793..798,833..834,869,871..872,931..932) /site_type="active" /note="putative active site [active]" /db_xref="CDD:238822" Site order(793..798,833,871) /site_type="other" /note="putative NTP binding site [chemical binding]" /db_xref="CDD:238822" Site 834 /site_type="other" /note="putative nucleic acid binding site [nucleotide binding]" /db_xref="CDD:238822" Region 956..1116 /region_name="Peptidase_A17" /note="Pao retrotransposon peptidase; pfam05380" /db_xref="CDD:461634" Region 1348..1396 /region_name="Integrase_H2C2" /note="Integrase zinc binding domain; pfam17921" /db_xref="CDD:465569" Region 1623..1715 /region_name="DUF5641" /note="Family of unknown function (DUF5641); pfam18701" /db_xref="CDD:465838" CDS 1..1720 /gene="LOC123003142" /coded_by="XM_070218510.1:1..5163" /db_xref="GeneID:123003142" ORIGIN 1 mcptpldvlk qkrsnirrsi srigtavakt ekvekpdaal tpaeltcrqt ileayfkqim 61 avqteieald steeqlnyra eledmfiaik vtikdqlgdd vhnstplahd tllrpgppss 121 lklptlalpt fageyseykn fittfqqvvd qqealssiek fnhlinclrg aaletikafq 181 vtpenytkal lrlksrydnp tivfldnias lfklptvtte nsvqlrslvd nasalfnsmr 241 slgseaqiaq amlitivmek vdkrtrqlwn esltfatlps wnacltlier hcqhlessih 301 hfgntntaqn tsgrmrqpqa prmghsftcs tqtcpicsgr dhrifrcprl qtmtpaqrle 361 avrtkslctn clgkahhpsn cpslnrcric srlhhtmlhf dpsgqesrsp rrpsppnapp 421 qhhvaeavth ahvdthhdqv ilataiilvq davgnyvpgr alldscsqvn fmsedfaqql 481 rlprskghid irsigdsftr ikhrtstvvk srfgdvelpv eccitsriay qpdaeidiss 541 wnlpdnapla derfyqsrhi dlllgtetff talsigqikl gphlpmlqkt ifgwvvsgrt 601 gnqghaahah sflsseesin lnlerlwrie eifttpltlt paqakcesif qksvcqvadg 661 rlmirlpfkd dpnllgrsle tarlrfasle rrlsrnanlr aeytkfmdey erlghmelvt 721 spllnephyy iphhcvfkln ststklrvvf dascptstyk slndillvgp tiqpdlftll 781 lrfrthryvi tadvvkmyrq vlidpahrkf qyilwrshid qeirtyqlnt vtygtasapy 841 lairslshla dqhasshqig aeaikscfyv ddflggadtl dqlnqirtev iailtagkme 901 lakwhsnhqd fvndttvkel nlddyattst lglkwdqred vfkfsfncst aperitkrti 961 lsvasslfdp lglvspvimv akillqeiwl lrlqwdesvp mtlqqawlsf vsslqhldsl 1021 liprfclqph sdelqlhgfs dasirgygcc iyartrladg hvevhliask srvaptkkkt 1081 lpqlelcgah llarlynqik aaflqhtpdt flwtdsqlvl hwirqhsatl stfvgnrisd 1141 iqeftrdchw rfvptrhnpa dmisrgcnla eltkstwfhg ptflsnpptl wppnvhgnld 1201 vdvvssekrk saflastpps rnnvlealhn keshqsglrl vawmlrfcdr cqkkkpfttg 1261 plsplelrra mlcvawnlqq ryfieeitll qrgapvrshl kflspflqvt dgfnllfvgg 1321 rlelasipdt hkhpillpak dvavvnyvrh lhlrnyhagp kvlvglmrle fwvvnardva 1381 rrvvrncvhc vryrpkllqq lmgnlpverl tlsrpfarcg idfcgpvhty lrvrgkmpvk 1441 syiaifvcfa tkaahieivg elstdsflga lkrmiarrgl psdifcdnat nfvgasnklq 1501 dlkdfffstk tqqditsyct nefvtfhfip praphfgglw eaavksaknl lcrtlkdarl 1561 tfeelstvaa eteailnsrp lsphssdpsd lavltpghfl tgdslralpd wpvkddqlnc 1621 sqrwkrvsai kqhiwrrwst eylhelqaks nwstgssnia vnemvlihed hvpphrwllg 1681 rieaaipgkd nhvrvadvrt skgiirrpih klarlpinlk