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LOCUS XP_044252103 1815 aa linear INV 09-DEC-2024 ACCESSION XP_044252103 VERSION XP_044252103.1 DBLINK BioProject: PRJNA1194641 DBSOURCE REFSEQ: accession XM_044396168.2 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..1815 /organism="Drosophila takahashii" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" Protein 1..1815 /product="chaoptin" /calculated_mol_wt=202133 Region 300..322 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 322..381 /region_name="LRR_8" /note="Leucine rich repeat; pfam13855" /db_xref="CDD:404697" Region 324..347 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 348..369 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 370..430 /region_name="LRR_8" /note="Leucine rich repeat; pfam13855" /db_xref="CDD:404697" Region 371..419 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 396..416 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region <413..>641 /region_name="LRR" /note="Leucine-rich repeat (LRR) protein [Transcription]; COG4886" /db_xref="CDD:443914" Region 459..482 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 483..506 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 507..530 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 531..553 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 554..577 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 559..982 /region_name="LRR" /note="Leucine-rich repeat (LRR) protein [Transcription]; COG4886" /db_xref="CDD:443914" Region 578..601 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 602..625 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 626..649 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 650..673 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 674..697 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 698..745 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 722..733 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275378" Region 746..769 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 770..790 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 818..841 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 842..865 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 861..1223 /region_name="LRR" /note="Leucine-rich repeat (LRR) protein [Transcription]; COG4886" /db_xref="CDD:443914" Region 866..889 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 890..912 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 913..941 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 942..965 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 966..989 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 990..1013 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1014..1037 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1038..1061 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1086..1111 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1112..1159 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1152..1314 /region_name="PPP1R42" /note="protein phosphatase 1 regulatory subunit 42; cl42388" /db_xref="CDD:455733" Region 1160..1183 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1184..1207 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1208..1230 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1231..1254 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1255..1276 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" Region 1279..1303 /region_name="leucine-rich repeat" /note="leucine-rich repeat [structural motif]" /db_xref="CDD:275380" CDS 1..1815 /gene="LOC108070023" /coded_by="XM_044396168.2:56..5503" /db_xref="GeneID:108070023" ORIGIN 1 mckgsnsrtt aplvnllakc tkstneqaav lenekesenr gnlvpqkqra krqnkqhpql 61 qqqhqqqqql qqqqeqhqeh nqrqqqgrqi eqmamgtnee aaaakeheqq tkltdseckg 121 khkhrrnrnn vagvqqhvlr sellllalfp villlmllpp dtaasmtpsa risissakgp 181 arellftemg gggggggggg ggegslggaa asgergpgpg lgaggggaag iecpsfdnta 241 cpcykfedgl flecpgttai slrstleris apihslsiyd fdrsvtslsq dvfqpgvhir 301 hlqfshshle alkdnslrnv rssleslsiv ngkltqmpsr alssmqklta ldfdyneivr 361 vedysfyglr lsklnlkgnr lqgmpehafa gleecmqeid vsenglrtfp lmalrkldhl 421 rilrlsnnri ptfygdiqla tnnasaaaaa agafqlpsli fldlssnqfa eigddcfraf 481 pqlktlsfya nqielvqpea fkslrelmsl dmshnriisl dpkvfernkr lqtvdlshnh 541 ihaiggvfsd lpqlrevfls ennilelpad aftnstnvdv iylesnaiah idpnvfstlv 601 nldhlylrsn fipllpvtlf dkstkltsls ldnneiqdle igmfrklehl revrlhnnri 661 rrvrkgvfep lpalqelhiq knsiediepq afhtlanmqh inlqdnqltv ledifpddns 721 sllsvqlean ylhkvhprtf rrqqkvqimw lkdnqlarve rsffadtpql grlylsdnri 781 rdiekdtfvn llllqfldls gnqlrqlrrd yfaplqglee lsiarnhiea iegyafaklk 841 nlktldlshn plvqltrdvf ldelplnsls lancslrkle qhafksltnl ndlnlernql 901 npadiqkldi pnlrrlllnh nnfshvgsgg imagmfdrlr slqqlsmsnc slgqipdllf 961 akntnlvrld lcdnrlsqmn rnifsglnvf kelklcrnql sefphialyn lstlesldla 1021 rnqlasidff klsgtlnlrq lvlrdnkita lsgfnavnlt qldsvdlsgn lllslpanfl 1081 rhsinlqkvd lssnrflqip ssalsdvsip rlswlnltgn pinriytvke erypylkely 1141 icqtnlsilt skdfeafqal qhlhlvnnri trispgafks ltnlltldls vnelemlpke 1201 rlqglrllrf lnishntlkd leefsadlse mqtldlsfnq ldriskktfr nlhgllelll 1261 mgnrmtvlsn dafrflrklh vldlrknyfe lvpldplkpl etnlktlkle enplhcscda 1321 qklwewlrdh rkwslstgsg sgggigglsg glggdsinyl rcehptelrg kvfgrmepqq 1381 fcdaplipkm aiqdiqpysv vvswqsrdhl glngfeivyh atgdglvpag sptdrerdgy 1441 rergqepdkq rnrerereke rdrdrfpvat deihgkrlng tasstkltkl spntryhicv 1501 igsgnwlsep lanalqrlha neslreeeav mmsaplpesf spyqhqhqhn rnthtngali 1561 qdqnhnqdhd ldnavvldhv lmevlknshi sactdvqtld stpslvtden glssngfihs 1621 iltrrlgliv gcclgiivfi vmisvlsyvk lkkqrienak rqaalppeyi syrhfsipne 1681 eltrtaanag aaaaaaaaaa apknssnsad asssphmtsv psgisahisg tslstggtgt 1741 ttttattpig gvpimgvplg kagsplvgvg lvvadssvdg vhahshnhah ghahrqnngy 1801 maagvvlntn hlsvc