protein sidekick isoform X8 [Drosophila obscura].
LOCUS XP_041447893 2257 aa linear INV 14-MAY-2021
ACCESSION XP_041447893
VERSION XP_041447893.1
DBLINK BioProject: PRJNA728747
DBSOURCE REFSEQ: accession XM_041591959.1
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
COMPLETENESS: full length.
FEATURES Location/Qualifiers
source 1..2257
/organism="Drosophila obscura"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
Protein 1..2257
/product="protein sidekick isoform X8"
/calculated_mol_wt=250579
Region 83..153
/region_name="Ig_3"
/note="Immunoglobulin domain; pfam13927"
/db_xref="CDD:464046"
Region 272..367
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 290..294
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409353"
Region 305..309
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409353"
Region 330..334
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409353"
Region 344..349
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409353"
Region 358..361
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409353"
Region 371..462
/region_name="Ig"
/note="Immunoglobulin domain; cl11960"
/db_xref="CDD:472250"
Region 389..393
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409543"
Region 402..406
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409543"
Region 428..431
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409543"
Region 441..446
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409543"
Region 454..457
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409543"
Region 466..553
/region_name="I-set"
/note="Immunoglobulin I-set domain; pfam07679"
/db_xref="CDD:400151"
Region 483..487
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409562"
Region 496..500
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409562"
Region 520..523
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409562"
Region 533..538
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409562"
Region 546..549
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409562"
Region 558..647
/region_name="I-set"
/note="Immunoglobulin I-set domain; pfam07679"
/db_xref="CDD:400151"
Region 574..578
/region_name="Ig strand B"
/note="Ig strand B [structural motif]"
/db_xref="CDD:409544"
Region 589..593
/region_name="Ig strand C"
/note="Ig strand C [structural motif]"
/db_xref="CDD:409544"
Region 613..617
/region_name="Ig strand E"
/note="Ig strand E [structural motif]"
/db_xref="CDD:409544"
Region 627..632
/region_name="Ig strand F"
/note="Ig strand F [structural motif]"
/db_xref="CDD:409544"
Region 640..643
/region_name="Ig strand G"
/note="Ig strand G [structural motif]"
/db_xref="CDD:409544"
Region 651..758
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(651,732,747)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Site order(748..749,751..752)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region 773..868
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(857..858,860..861)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region 876..980
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(969..970,972..973)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Site order(985,1050,1065)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Region 986..1069
/region_name="fn3"
/note="Fibronectin type III domain; pfam00041"
/db_xref="CDD:394996"
Region 1083..1172
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(1083,1149,1164)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Site order(1165..1166,1168..1169)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region 1185..1273
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Region 1292..1377
/region_name="fn3"
/note="Fibronectin type III domain; pfam00041"
/db_xref="CDD:394996"
Region 1365..1916
/region_name="FN3"
/note="Fibronectin type 3 domain [General function
prediction only]; COG3401"
/db_xref="CDD:442628"
Site order(1373..1374,1376..1377)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
Region 1901..2007
/region_name="FN3"
/note="Fibronectin type 3 domain; One of three types of
internal repeats found in the plasma protein fibronectin.
Its tenth fibronectin type III repeat contains an RGD cell
recognition sequence in a flexible loop between 2 strands.
Approximately 2% of all...; cd00063"
/db_xref="CDD:238020"
Site order(1901,1985,2000)
/site_type="active"
/note="Interdomain contacts [active]"
/db_xref="CDD:238020"
Site order(2001..2002,2004..2005)
/site_type="active"
/note="Cytokine receptor motif [active]"
/db_xref="CDD:238020"
CDS 1..2257
/gene="LOC111066347"
/coded_by="XM_041591959.1:351..7124"
/db_xref="GeneID:111066347"
ORIGIN
1 mkrdqrrssa sslrrrrrwc vdvnekgtrm wlkislsqpl easlfvlaal lllnadscsc
61 yadanpqqqq qlvqqqqqql qaprftthps ssgsivsegs tkilqchalg ypqptyrwlk
121 dgksvgefss sqfyrfhstr redagsyqci akndagsifs eksdvvvaym gifenvtegr
181 ltvvsghpai fdmpaiesvp tpsvlwqsad gslnydikya ftqanqliil svdendrrgy
241 raraintqlg keeisafvhl nvsgdpyiev apeiivrpqd vkvktgtgvl elqcianarp
301 lheletiwlk dglavdttgv rhtlndpwnr tlallqanss hsgeytcqvr lrsggyptvt
361 asarvqilep pvfftpmrae tfgefggqvq lpcdvvgept pqvewfrnae sveanvqsgr
421 yslgedntli ikklilddsa mfqclarnea gensastwlr vktsapvfeq ppqnvtaldg
481 kdatiscrai gspnpnvtwi ynetqlveis srvqilesgd llisniratd aglyicvran
541 eagsvkgeal lsvlvrtqii qppvdtivll gltatlqckv ssdpsvpyni dwyregqmap
601 isnsqrigvq adgqleiqav rasdvgsysc vvtspggnet rsarlsviel pfppsnvrve
661 rlpepqqrsi nvswtpgfdg nspiskfiiq rrevselekf vgpvpdplln witelsnvsa
721 nqrwmllenl kaatvyqfrv savnrvgegs psepsnvvel pqeefplyra psgppvgfvg
781 sarsmseiit qwqppqeehr ngqilgyilr yrlfgynnvp wsyqnitnea qrnfliqeli
841 twkdyivqia afnnmgvgvy tegakiktke gvpeapptnv rvkalnstaa qitwkppnpq
901 qinginqgyk iqawqrrqld geerdmerrm mtvppslidp laeqttvlgg ldkfakfnvt
961 vlcftdpgdg vasqlvpvet lddvpdeita lhfddvsdrs vkvlwapprf angiltgytv
1021 ryqvkdrpet mkffnltadd neltvnqlqa tthywfevca wtrvgsgppk tatiqsgvep
1081 vlphapttla lsnieafsvv lqftpgfdgn ssitkwkvea qtarnmtwft lceisdpdae
1141 tltvtglmpf tqyrlrlsat nvvgssrpsd ptkdfqtiqa kpmhapfnvt vramsalqlr
1201 vrwiplqqme wfgnprgynv tyrqmertgk pskhpprsvm iedhtanshv legleewtly
1261 evimnacndv gcsldsglam ertreavpsy gplhveanat ssttvvvrwg eipphhrngq
1321 idgykvyyaa tergmqvlyk tipnnssftt tltelqkfvv yhvqvlaytr lgngalstpp
1381 irvqtfedtp gspsnvsfpd vtfsmariiw dvpmdpngei layqvtytln gsanlnysre
1441 fppsdrtfra tglmperyys fsvtaqtrlg wgktasvlvy ttnnrdrpqa psgpqvsrsq
1501 iqahqitfnw tpgrdgfapl ryytvemren egrwqplper vdptlssyta lglrpyttyq
1561 friqatndlg psafsresiv vrtlpaapav gvgglkvvpi tttsvrvqwg aletgmwngd
1621 aatggyrily qqlsdfapal qstpktdvmg inensvvlsd lqqdrnyeiv vlpfnsqgpg
1681 patpptavyv geavptgepr gvdataisst evrlswkppk qssqngeilg ykifylvtws
1741 pqalepgrkf eeeievvsat atshslvfld kfteyriqll afnpagdgpr sapvtaktmp
1801 gvpsaplnlr fsditmqsle vtwdppklln geivgylvty etteenekfs kqvkqkvsnt
1861 tlrvqnleee vtytftvraq tndygpavsa nvttgpqdgs pvaprdltlt ktlssvevhw
1921 vngpsgrgpi lgylieakkr engepsfisn rppylrldds rwtkieqsrk gtmkeftvsy
1981 hilmpstayl frviaynkyg isfpvyskds iltpsklhle ygylqhkpfy rqtwfmvsla
2041 atsiviivmv iavlcvksks ykykqeaqkt leesmamsid erqelalely rsrhgvgtgt
2101 lnsvgtlrsg tlgtlgrkst nrhqpvsvhl gkspprpspa svayhsdees lkcydenpdd
2161 ssvtekpsev ssseasqhse senesvrsdp hsfvnhyanv ndslrqswkk tkpvrnyssy
2221 tdsepegsav mslnggqiiv nnmarsrapl pgfssfv