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LOCUS XP_041447888 2310 aa linear INV 14-MAY-2021 ACCESSION XP_041447888 VERSION XP_041447888.1 DBLINK BioProject: PRJNA728747 DBSOURCE REFSEQ: accession XM_041591954.1 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2310 /organism="Drosophila obscura" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" Protein 1..2310 /product="protein sidekick isoform X4" /calculated_mol_wt=256169 Region 83..153 /region_name="Ig_3" /note="Immunoglobulin domain; pfam13927" /db_xref="CDD:464046" Region 272..367 /region_name="Ig" /note="Immunoglobulin domain; cl11960" /db_xref="CDD:472250" Region 290..294 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409353" Region 305..309 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409353" Region 330..334 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409353" Region 344..349 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409353" Region 358..361 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409353" Region 371..462 /region_name="Ig" /note="Immunoglobulin domain; cl11960" /db_xref="CDD:472250" Region 389..393 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409543" Region 402..406 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409543" Region 428..431 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409543" Region 441..446 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409543" Region 454..457 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409543" Region 527..614 /region_name="I-set" /note="Immunoglobulin I-set domain; pfam07679" /db_xref="CDD:400151" Region 544..548 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409562" Region 557..561 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409562" Region 581..584 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409562" Region 594..599 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409562" Region 607..610 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409562" Region 619..708 /region_name="I-set" /note="Immunoglobulin I-set domain; pfam07679" /db_xref="CDD:400151" Region 635..639 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409544" Region 650..654 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409544" Region 674..678 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409544" Region 688..693 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409544" Region 701..704 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409544" Region 712..819 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(712,793,808) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(809..810,812..813) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 834..929 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(918..919,921..922) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 937..1041 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1030..1031,1033..1034) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Site order(1046,1111,1126) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Region 1047..1130 /region_name="fn3" /note="Fibronectin type III domain; pfam00041" /db_xref="CDD:394996" Region 1144..1233 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1144,1210,1225) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(1226..1227,1229..1230) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 1246..1334 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Region 1353..1438 /region_name="fn3" /note="Fibronectin type III domain; pfam00041" /db_xref="CDD:394996" Region 1426..1977 /region_name="FN3" /note="Fibronectin type 3 domain [General function prediction only]; COG3401" /db_xref="CDD:442628" Site order(1434..1435,1437..1438) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 1962..2068 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1962,2046,2061) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(2062..2063,2065..2066) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" CDS 1..2310 /gene="LOC111066347" /coded_by="XM_041591954.1:351..7283" /db_xref="GeneID:111066347" ORIGIN 1 mkrdqrrssa sslrrrrrwc vdvnekgtrm wlkislsqpl easlfvlaal lllnadscsc 61 yadanpqqqq qlvqqqqqql qaprftthps ssgsivsegs tkilqchalg ypqptyrwlk 121 dgksvgefss sqfyrfhstr redagsyqci akndagsifs eksdvvvaym gifenvtegr 181 ltvvsghpai fdmpaiesvp tpsvlwqsad gslnydikya ftqanqliil svdendrrgy 241 raraintqlg keeisafvhl nvsgdpyiev apeiivrpqd vkvktgtgvl elqcianarp 301 lheletiwlk dglavdttgv rhtlndpwnr tlallqanss hsgeytcqvr lrsggyptvt 361 asarvqilep pvfftpmrae tfgefggqvq lpcdvvgept pqvewfrnae sveanvqsgr 421 yslgedntli ikklilddsa mfqclarnea gensastwlr vkteteteaa nsrikrlaqp 481 rilrvrashg gsgtvagsvt gsgsgsgsts nshqqgrrkq frfasapvfe qppqnvtald 541 gkdatiscra igspnpnvtw iynetqlvei ssrvqilesg dllisnirat daglyicvra 601 neagsvkgea llsvlvrtqi iqppvdtivl lgltatlqck vssdpsvpyn idwyregqma 661 pisnsqrigv qadgqleiqa vrasdvgsys cvvtspggne trsarlsvie lpfppsnvrv 721 erlpepqqrs invswtpgfd gnspiskfii qrrevselek fvgpvpdpll nwitelsnvs 781 anqrwmllen lkaatvyqfr vsavnrvgeg spsepsnvve lpqeefplyr apsgppvgfv 841 gsarsmseii tqwqppqeeh rngqilgyil ryrlfgynnv pwsyqnitne aqrnfliqel 901 itwkdyivqi aafnnmgvgv ytegakiktk egvpeapptn vrvkalnsta aqitwkppnp 961 qqinginqgy kiqawqrrql dgeerdmerr mmtvppslid plaeqttvlg gldkfakfnv 1021 tvlcftdpgd gvasqlvpve tlddvpdeit alhfddvsdr svkvlwappr fangiltgyt 1081 vryqvkdrpe tmkffnltad dneltvnqlq atthywfevc awtrvgsgpp ktatiqsgve 1141 pvlphapttl alsnieafsv vlqftpgfdg nssitkwkve aqtarnmtwf tlceisdpda 1201 etltvtglmp ftqyrlrlsa tnvvgssrps dptkdfqtiq akpmhapfnv tvramsalql 1261 rvrwiplqqm ewfgnprgyn vtyrqmertg kpskhpprsv miedhtansh vlegleewtl 1321 yevimnacnd vgcsldsgla mertreavps ygplhveana tssttvvvrw geipphhrng 1381 qidgykvyya atergmqvly ktipnnssft ttltelqkfv vyhvqvlayt rlgngalstp 1441 pirvqtfedt pgspsnvsfp dvtfsmarii wdvpmdpnge ilayqvtytl ngsanlnysr 1501 efppsdrtfr atglmperyy sfsvtaqtrl gwgktasvlv yttnnrdrpq apsgpqvsrs 1561 qiqahqitfn wtpgrdgfap lryytvemre negrwqplpe rvdptlssyt alglrpytty 1621 qfriqatndl gpsafsresi vvrtlpaapa vgvgglkvvp itttsvrvqw galetgmwng 1681 daatggyril yqqlsdfapa lqstpktdvm ginensvvls dlqqdrnyei vvlpfnsqgp 1741 gpatpptavy vgeavptgep rgvdataiss tevrlswkpp kqssqngeil gykifylvtw 1801 spqalepgrk feeeievvsa tatshslvfl dkfteyriql lafnpagdgp rsapvtaktm 1861 pgvpsaplnl rfsditmqsl evtwdppkll ngeivgylvt yetteenekf skqvkqkvsn 1921 ttlrvqnlee evtytftvra qtndygpavs anvttgpqdg spvaprdltl tktlssvevh 1981 wvngpsgrgp ilgylieakk rengepsfis nrppylrldd srwtkieqsr kgtmkeftvs 2041 yhilmpstay lfrviaynky gisfpvyskd siltpsklhl eygylqhkpf yrqtwfmvsl 2101 aatsiviivm viavlcvksk sykykqeaqk tleesmamsi derqelalel yrsrhgvgtg 2161 tlnsvgtlrs gtlgtlgrks tnrhqpvsvh lgkspprpsp asvayhsdee slkcydenpd 2221 dssvtekpse hsesenesvr sdphsfvnhy anvndslrqs wkktkpvrny ssytdsepeg 2281 savmslnggq iivnnmarsr aplpgfssfv