Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XP_041447887 2312 aa linear INV 14-MAY-2021 ACCESSION XP_041447887 VERSION XP_041447887.1 DBLINK BioProject: PRJNA728747 DBSOURCE REFSEQ: accession XM_041591953.1 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2312 /organism="Drosophila obscura" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" Protein 1..2312 /product="protein sidekick isoform X3" /calculated_mol_wt=256139 Region 83..153 /region_name="Ig_3" /note="Immunoglobulin domain; pfam13927" /db_xref="CDD:464046" Region 272..367 /region_name="Ig" /note="Immunoglobulin domain; cl11960" /db_xref="CDD:472250" Region 290..294 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409353" Region 305..309 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409353" Region 330..334 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409353" Region 344..349 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409353" Region 358..361 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409353" Region 371..462 /region_name="Ig" /note="Immunoglobulin domain; cl11960" /db_xref="CDD:472250" Region 389..393 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409543" Region 402..406 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409543" Region 428..431 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409543" Region 441..446 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409543" Region 454..457 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409543" Region 527..614 /region_name="I-set" /note="Immunoglobulin I-set domain; pfam07679" /db_xref="CDD:400151" Region 544..548 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409562" Region 557..561 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409562" Region 581..584 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409562" Region 594..599 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409562" Region 607..610 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409562" Region 619..708 /region_name="I-set" /note="Immunoglobulin I-set domain; pfam07679" /db_xref="CDD:400151" Region 635..639 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409544" Region 650..654 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409544" Region 674..678 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409544" Region <688..>949 /region_name="FN3" /note="Fibronectin type 3 domain [General function prediction only]; COG3401" /db_xref="CDD:442628" Region 688..693 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409544" Region 701..704 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409544" Region 712..819 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(712,793,808) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(809..810,812..813) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 931..1035 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1024..1025,1027..1028) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Site order(1040,1105,1120) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Region 1041..1124 /region_name="fn3" /note="Fibronectin type III domain; pfam00041" /db_xref="CDD:394996" Region 1138..1227 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1138,1204,1219) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(1220..1221,1223..1224) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 1240..1328 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Region 1347..1432 /region_name="fn3" /note="Fibronectin type III domain; pfam00041" /db_xref="CDD:394996" Region 1420..1971 /region_name="FN3" /note="Fibronectin type 3 domain [General function prediction only]; COG3401" /db_xref="CDD:442628" Site order(1428..1429,1431..1432) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 1956..2062 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1956,2040,2055) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(2056..2057,2059..2060) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" CDS 1..2312 /gene="LOC111066347" /coded_by="XM_041591953.1:351..7289" /db_xref="GeneID:111066347" ORIGIN 1 mkrdqrrssa sslrrrrrwc vdvnekgtrm wlkislsqpl easlfvlaal lllnadscsc 61 yadanpqqqq qlvqqqqqql qaprftthps ssgsivsegs tkilqchalg ypqptyrwlk 121 dgksvgefss sqfyrfhstr redagsyqci akndagsifs eksdvvvaym gifenvtegr 181 ltvvsghpai fdmpaiesvp tpsvlwqsad gslnydikya ftqanqliil svdendrrgy 241 raraintqlg keeisafvhl nvsgdpyiev apeiivrpqd vkvktgtgvl elqcianarp 301 lheletiwlk dglavdttgv rhtlndpwnr tlallqanss hsgeytcqvr lrsggyptvt 361 asarvqilep pvfftpmrae tfgefggqvq lpcdvvgept pqvewfrnae sveanvqsgr 421 yslgedntli ikklilddsa mfqclarnea gensastwlr vkteteteaa nsrikrlaqp 481 rilrvrashg gsgtvagsvt gsgsgsgsts nshqqgrrkq frfasapvfe qppqnvtald 541 gkdatiscra igspnpnvtw iynetqlvei ssrvqilesg dllisnirat daglyicvra 601 neagsvkgea llsvlvrtqi iqppvdtivl lgltatlqck vssdpsvpyn idwyregqma 661 pisnsqrigv qadgqleiqa vrasdvgsys cvvtspggne trsarlsvie lpfppsnvrv 721 erlpepqqrs invswtpgfd gnspiskfii qrrevselek fvgpvpdpll nwitelsnvs 781 anqrwmllen lkaatvyqfr vsavnrvgeg spsepsnvve lpqeapsgpp vgfvgsarsm 841 seiitqwqpp qeehrngqil gyilryrlfg ynnvpwsyqn itneaqrnfl iqelitwkdy 901 ivqiaafnnm gvgvytegak iktkegvpea pptnvrvkal nstaaqitwk ppnpqqingi 961 nqgykiqawq rrqldgeerd merrmmtvpp slidplaeqt tvlggldkfa kfnvtvlcft 1021 dpgdgvasql vpvetlddvp deitalhfdd vsdrsvkvlw apprfangil tgytvryqvk 1081 drpetmkffn ltaddneltv nqlqatthyw fevcawtrvg sgppktatiq sgvepvlpha 1141 pttlalsnie afsvvlqftp gfdgnssitk wkveaqtarn mtwftlceis dpdaetltvt 1201 glmpftqyrl rlsatnvvgs srpsdptkdf qtiqakpmha pfnvtvrams alqlrvrwip 1261 lqqmewfgnp rgynvtyrqm ertgkpskhp prsvmiedht anshvlegle ewtlyevimn 1321 acndvgcsld sglamertre avpsygplhv eanatssttv vvrwgeipph hrngqidgyk 1381 vyyaatergm qvlyktipnn ssftttltel qkfvvyhvqv laytrlgnga lstppirvqt 1441 fedtpgspsn vsfpdvtfsm ariiwdvpmd pngeilayqv tytlngsanl nysrefppsd 1501 rtfratglmp eryysfsvta qtrlgwgkta svlvyttnnr drpqapsgpq vsrsqiqahq 1561 itfnwtpgrd gfaplryytv emrenegrwq plpervdptl ssytalglrp yttyqfriqa 1621 tndlgpsafs resivvrtlp aapavgvggl kvvpitttsv rvqwgaletg mwngdaatgg 1681 yrilyqqlsd fapalqstpk tdvmginens vvlsdlqqdr nyeivvlpfn sqgpgpatpp 1741 tavyvgeavp tgeprgvdat aisstevrls wkppkqssqn geilgykify lvtwspqale 1801 pgrkfeeeie vvsatatshs lvfldkftey riqllafnpa gdgprsapvt aktmpgvpsa 1861 plnlrfsdit mqslevtwdp pkllngeivg ylvtyettee nekfskqvkq kvsnttlrvq 1921 nleeevtytf tvraqtndyg pavsanvttg pqdgspvapr dltltktlss vevhwvngps 1981 grgpilgyli eakkrengep sfisnrppyl rlddsrwtki eqsrkgtmke ftvsyhilmp 2041 staylfrvia ynkygisfpv yskdsiltps klhleygylq hkpfyrqtwf mvslaatsiv 2101 iivmviavlc vksksykykq eaqktleesm amsiderqel alelyrsrhg vgtgtlnsvg 2161 tlrsgtlgtl grkstnrhqp vsvhlgkspp rpspasvayh sdeeslkcyd enpddssvte 2221 kpsevsssea sqhsesenes vrsdphsfvn hyanvndslr qswkktkpvr nyssytdsep 2281 egsavmslng gqiivnnmar sraplpgfss fv