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LOCUS XP_041447886 2314 aa linear INV 14-MAY-2021 ACCESSION XP_041447886 VERSION XP_041447886.1 DBLINK BioProject: PRJNA728747 DBSOURCE REFSEQ: accession XM_041591952.1 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2314 /organism="Drosophila obscura" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" Protein 1..2314 /product="protein sidekick isoform X2" /calculated_mol_wt=256441 Region 83..153 /region_name="Ig_3" /note="Immunoglobulin domain; pfam13927" /db_xref="CDD:464046" Region 272..367 /region_name="Ig" /note="Immunoglobulin domain; cl11960" /db_xref="CDD:472250" Region 290..294 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409353" Region 305..309 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409353" Region 330..334 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409353" Region 344..349 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409353" Region 358..361 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409353" Region 371..462 /region_name="Ig" /note="Immunoglobulin domain; cl11960" /db_xref="CDD:472250" Region 389..393 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409543" Region 402..406 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409543" Region 428..431 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409543" Region 441..446 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409543" Region 454..457 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409543" Region 527..614 /region_name="I-set" /note="Immunoglobulin I-set domain; pfam07679" /db_xref="CDD:400151" Region 544..548 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409562" Region 557..561 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409562" Region 581..584 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409562" Region 594..599 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409562" Region 607..610 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409562" Region 619..708 /region_name="I-set" /note="Immunoglobulin I-set domain; pfam07679" /db_xref="CDD:400151" Region 635..639 /region_name="Ig strand B" /note="Ig strand B [structural motif]" /db_xref="CDD:409544" Region 650..654 /region_name="Ig strand C" /note="Ig strand C [structural motif]" /db_xref="CDD:409544" Region 674..678 /region_name="Ig strand E" /note="Ig strand E [structural motif]" /db_xref="CDD:409544" Region <688..>951 /region_name="FN3" /note="Fibronectin type 3 domain [General function prediction only]; COG3401" /db_xref="CDD:442628" Region 688..693 /region_name="Ig strand F" /note="Ig strand F [structural motif]" /db_xref="CDD:409544" Region 701..704 /region_name="Ig strand G" /note="Ig strand G [structural motif]" /db_xref="CDD:409544" Region 712..815 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(712,789,804) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(805..806,808..809) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 933..1037 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1026..1027,1029..1030) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Site order(1042,1107,1122) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Region 1043..1126 /region_name="fn3" /note="Fibronectin type III domain; pfam00041" /db_xref="CDD:394996" Region 1140..1229 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1140,1206,1221) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(1222..1223,1225..1226) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 1242..1330 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Region 1349..1434 /region_name="fn3" /note="Fibronectin type III domain; pfam00041" /db_xref="CDD:394996" Region 1422..1973 /region_name="FN3" /note="Fibronectin type 3 domain [General function prediction only]; COG3401" /db_xref="CDD:442628" Site order(1430..1431,1433..1434) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" Region 1958..2064 /region_name="FN3" /note="Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all...; cd00063" /db_xref="CDD:238020" Site order(1958,2042,2057) /site_type="active" /note="Interdomain contacts [active]" /db_xref="CDD:238020" Site order(2058..2059,2061..2062) /site_type="active" /note="Cytokine receptor motif [active]" /db_xref="CDD:238020" CDS 1..2314 /gene="LOC111066347" /coded_by="XM_041591952.1:351..7295" /db_xref="GeneID:111066347" ORIGIN 1 mkrdqrrssa sslrrrrrwc vdvnekgtrm wlkislsqpl easlfvlaal lllnadscsc 61 yadanpqqqq qlvqqqqqql qaprftthps ssgsivsegs tkilqchalg ypqptyrwlk 121 dgksvgefss sqfyrfhstr redagsyqci akndagsifs eksdvvvaym gifenvtegr 181 ltvvsghpai fdmpaiesvp tpsvlwqsad gslnydikya ftqanqliil svdendrrgy 241 raraintqlg keeisafvhl nvsgdpyiev apeiivrpqd vkvktgtgvl elqcianarp 301 lheletiwlk dglavdttgv rhtlndpwnr tlallqanss hsgeytcqvr lrsggyptvt 361 asarvqilep pvfftpmrae tfgefggqvq lpcdvvgept pqvewfrnae sveanvqsgr 421 yslgedntli ikklilddsa mfqclarnea gensastwlr vkteteteaa nsrikrlaqp 481 rilrvrashg gsgtvagsvt gsgsgsgsts nshqqgrrkq frfasapvfe qppqnvtald 541 gkdatiscra igspnpnvtw iynetqlvei ssrvqilesg dllisnirat daglyicvra 601 neagsvkgea llsvlvrtqi iqppvdtivl lgltatlqck vssdpsvpyn idwyregqma 661 pisnsqrigv qadgqleiqa vrasdvgsys cvvtspggne trsarlsvie lpfppsnvrv 721 erlpepqqrs invswtpgfd gnspiskfii qrrevselgp vpdpllnwit elsnvsanqr 781 wmllenlkaa tvyqfrvsav nrvgegspse psnvvelpqe efplyrapsg ppvgfvgsar 841 smseiitqwq ppqeehrngq ilgyilryrl fgynnvpwsy qnitneaqrn fliqelitwk 901 dyivqiaafn nmgvgvyteg akiktkegvp eapptnvrvk alnstaaqit wkppnpqqin 961 ginqgykiqa wqrrqldgee rdmerrmmtv ppslidplae qttvlggldk fakfnvtvlc 1021 ftdpgdgvas qlvpvetldd vpdeitalhf ddvsdrsvkv lwapprfang iltgytvryq 1081 vkdrpetmkf fnltaddnel tvnqlqatth ywfevcawtr vgsgppktat iqsgvepvlp 1141 hapttlalsn ieafsvvlqf tpgfdgnssi tkwkveaqta rnmtwftlce isdpdaetlt 1201 vtglmpftqy rlrlsatnvv gssrpsdptk dfqtiqakpm hapfnvtvra msalqlrvrw 1261 iplqqmewfg nprgynvtyr qmertgkpsk hpprsvmied htanshvleg leewtlyevi 1321 mnacndvgcs ldsglamert reavpsygpl hveanatsst tvvvrwgeip phhrngqidg 1381 ykvyyaater gmqvlyktip nnssftttlt elqkfvvyhv qvlaytrlgn galstppirv 1441 qtfedtpgsp snvsfpdvtf smariiwdvp mdpngeilay qvtytlngsa nlnysrefpp 1501 sdrtfratgl mperyysfsv taqtrlgwgk tasvlvyttn nrdrpqapsg pqvsrsqiqa 1561 hqitfnwtpg rdgfaplryy tvemrenegr wqplpervdp tlssytalgl rpyttyqfri 1621 qatndlgpsa fsresivvrt lpaapavgvg glkvvpittt svrvqwgale tgmwngdaat 1681 ggyrilyqql sdfapalqst pktdvmgine nsvvlsdlqq drnyeivvlp fnsqgpgpat 1741 pptavyvgea vptgeprgvd ataisstevr lswkppkqss qngeilgyki fylvtwspqa 1801 lepgrkfeee ievvsatats hslvfldkft eyriqllafn pagdgprsap vtaktmpgvp 1861 saplnlrfsd itmqslevtw dppkllngei vgylvtyett eenekfskqv kqkvsnttlr 1921 vqnleeevty tftvraqtnd ygpavsanvt tgpqdgspva prdltltktl ssvevhwvng 1981 psgrgpilgy lieakkreng epsfisnrpp ylrlddsrwt kieqsrkgtm keftvsyhil 2041 mpstaylfrv iaynkygisf pvyskdsilt psklhleygy lqhkpfyrqt wfmvslaats 2101 iviivmviav lcvksksyky kqeaqktlee smamsiderq elalelyrsr hgvgtgtlns 2161 vgtlrsgtlg tlgrkstnrh qpvsvhlgks pprpspasva yhsdeeslkc ydenpddssv 2221 tekpsevsss easqhsesen esvrsdphsf vnhyanvnds lrqswkktkp vrnyssytds 2281 epegsavmsl nggqiivnnm arsraplpgf ssfv