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LOCUS XM_714098 2199 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_714098 VERSION XM_714098.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2199) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2199) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2199) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2199) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2199) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2199) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714098.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2199 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2199 /locus_tag="CAALFM_C603420WA" /db_xref="GeneID:3639235" CDS 1..2199 /locus_tag="CAALFM_C603420WA" /note="Ortholog(s) have role in DNA replication initiation, establishment of mitotic sister chromatid cohesion, mitotic spindle assembly checkpoint and condensed nuclear chromosome kinetochore localization" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_719191.2" /db_xref="CGD:CAL0000185504" /db_xref="GeneID:3639235" /translation="MSSNEEIINLLGRLNQNKNKNKTDDDSADNETTLNQLANLTKNG ISEPLIMIILDKIFNDTLKITDKNKLLDECLIPNHDLSIDVFFKIISIIGVSRVYFKG NRKFKSKQLSISLQLKLLQWMIDNFQFLENTFCKSGSIVLTLLVKSLDYEFSRGPISQ LIILVLNSSVSKSNQIITFYNQEIYHTINILKSNHIQTVVNLYNKFPLDIYLEELLAY FRVINPDLDYMIYSPENFPLLNKLNCNLNQVYRWKDSDELTATTITITTTTTTKSNKR QKTTITSKPDTLTHNIEVLDQINKINPYKLVRTAFDNEKEAQLLTILFQTGNNRFINK VDKYIGAILTTFTNSEKELQSFLQQVSHLYKISDGTIILPSIENFILDNNNNNSLSVG KFCQQFDYRSKLIKYLHNVDPMRLVTMIHHNASILKQIYYDTNNGSYETNSNFNYESC HDYVKNILYLLNLWIFENQDDIIISRINLLLPELYKFIKYCKHIQEQLTNQVVEFFIN LPSSLFNQLELKTIIIPRSLTYSCLLSCDPLVVSNITQHISNCKSHDYTNSTHYRDLQ NSYIMDTINFLWKERFLKQDTNLTNISSNKGFFLHPDFENKLNSLHTFDCSYYLSSSP STIGEFFYNPAFSYIVTKIIWDIEDNHNGINTRHEGPISRESLIRLRNDSDKIWLSLS FDELKLSILQNLEIKKFNGIADLLFNSLKSLADKRSLDKNNESTNSSSSS" misc_feature 94..678 /locus_tag="CAALFM_C603420WA" /note="N-terminal HEAT repeat domain of inner kinetochore subunit CTF3 and similar proteins; Region: CTF3_NTD_HEAT; cl06694" /db_xref="CDD:447084" misc_feature order(247..249,259..261,271..273,394..399,406..408, 415..420,427..429,448..459,529..537,592..594,601..603, 610..627) /locus_tag="CAALFM_C603420WA" /note="pentamer interface [polypeptide binding]; other site" /db_xref="CDD:439352" ORIGIN 1 atgtcatcta atgaagaaat aataaattta ttaggtagat tgaaccaaaa caaaaacaaa 61 aacaaaacag atgatgatag tgctgataat gaaacaacat tgaatcaact tgcaaattta 121 accaaaaatg gaatatccga accattaatt atgattattc ttgataaaat tttcaacgac 181 actttaaaga taactgataa aaataaatta cttgatgaat gtttaatacc taatcatgat 241 ttatcaattg atgtattttt caaaataata agtataattg gtgttagtcg agtttatttt 301 aaaggtaatc ggaaattcaa atcaaaacaa ttatctatct cattacaatt aaaactactt 361 caatggatga ttgataattt tcaattttta gagaacacat tttgtaaatc aggtagtatt 421 gttttaacat tacttgtgaa atccttagat tatgaatttt caagaggtcc aatatctcaa 481 ttaataattt tagtattaaa ttcactggta ctgaaaagta atcagataat cacgttttat 541 aatcaggaaa tttatcatac tatcaatatc cttaaatcaa atcatataca aacagtggtc 601 aatttatata ataaattccc gttagatatt tatttagagg aattattagc atactttaga 661 gtgattaatc ctgatttaga ttatatgata tattcaccag aaaatttccc attattgaat 721 aaattaaatt gtaatttaaa tcaagtatac cgatggaaag atagtgatga gctaaccgca 781 actactatta ctattaccac caccaccacc accaaaagca acaagagaca gaaaactact 841 attactagca aacctgatac gttaactcat aatattgaag tattagacca aataaataaa 901 atcaatcctt acaaattggt acgaactgca tttgataacg aaaaggaagc acaattactt 961 acgatattat ttcaaacggg gaataatcga tttattaata aagttgataa atatataggt 1021 gccattttaa caactttcac caatctggaa aaagaattac aaagtttttt acaacaagtc 1081 tcccatttat ataaaattag tgatggaaca attattttac ccctgataga aaatttcata 1141 cttgataata ataataataa ttcattactg gttgggaaat tttgtcaaca atttgattat 1201 cgttctaaat tgataaaata tctacataat gttgacccta tgagattagt aacaatgatt 1261 catcacaacg cctcaatttt aaaacaaatc tattatgaca ccaataatgg atcatacgaa 1321 actaatagta atttcaatta cgaatcatgt catgactatg tcaagaatat actatattta 1381 ttaaatttat ggatatttga aaaccaagat gatataataa tatcaagaat aaacctattg 1441 cttcctgaat tatataaatt tattaaatat tgtaaacata tacaagaaca attgaccaat 1501 caagtggttg aattctttat aaatttacca tcttcattat tcaatcaatt ggaacttaaa 1561 acaataataa tcccaagatc gttaacatat tcatgtttat taagttgtga ccccctagtg 1621 gtatctaata ttactcaaca tatatcaaat tgtaaatctc atgattatac aaattcaact 1681 cattatcgag atttacaaaa ttcttatatt atggatacaa ttaatttctt atggaaagaa 1741 cgatttttaa aacaagatac aaatttaact aatattagtt caaataaagg atttttttta 1801 catcctgatt ttgaaaataa attaaattca ttacatactt ttgattgttc ttattattta 1861 tcttcttcac cttcaactat tggagaattt ttttataatc cagctttttc atatatcgtg 1921 acaaaaatca tttgggatat tgaagataat cataatggta ttaatactag acatgaaggt 1981 cctatatcaa gagaaagttt aatacgatta agaaatgata gtgataaaat ttggttatca 2041 ttatcatttg atgaattgaa attgtcaata cttcaaaatt tggaaattaa aaaatttaat 2101 ggtattgctg atttattatt taattctttg aaaagtttag ctgataaaag aagtcttgat 2161 aaaaacaatg aatctacaaa tagtagtagt agtagttaa