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LOCUS XM_714089 2055 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_714089 VERSION XM_714089.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2055) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2055) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2055) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2055) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2055) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2055) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714089.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2055 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2055 /gene="GLC3" /locus_tag="CAALFM_C603340CA" /db_xref="GeneID:3639200" CDS 1..2055 /gene="GLC3" /locus_tag="CAALFM_C603340CA" /note="Putative 1,4-glucan branching enzyme; fluconazole-induced; colony morphology-related gene regulation by Ssn6; stationary phase enriched protein" /codon_start=1 /transl_table=12 /product="1,4-alpha-glucan branching enzyme" /protein_id="XP_719182.2" /db_xref="CGD:CAL0000188820" /db_xref="GeneID:3639200" /translation="MSKSLIQGVLDLDPWLEPFSQPLINRQIEFQKWHKKLIESEGSL IDFANSYKKYGVHTLPSGEIQIIQYIPDVDEVSIVGDFNNWNKDSHKLRKLNEFGTWE LTLKPGSIPIDSKYKIAMKTTTTTTTTTTTKNGGEWIYRLDPWVHRATFAKQHALYEG HFWEDNYQFKNPRPKKNIAAGGIKIYEAHVGISTPEPTIGSYKNFTQNVLPIIRDLGY NTIQLMAIMEHAYYASFGYQVTSFFAISSRYGTPDELKELIDTAHGMGIQVLLDVVHS HSSKNVDDGLNMFNGTDHYLFHGGSRGNHDLWDSRLFNYTNYETLRFLLSNLKYYIDV FQFDGFRFDGVTSMLYKHHGLSVGFSGGYHEYFGDGVDNEAIVYLMLAHQLMNEISTT ENFNLTSIAEDVSGMPTLCRPISDGGIGFNYRLSMAIPDMWIKILKHLTDEQWDLGNI VHTLTNRRYGEKVIAYCESHDQALVGDKTLAFWLMDKEMYTNMSVLSPLTPIIDRGIA LHKLIRLVTFALGGDGYLNFEGNEFGHPEWLDFPRQGNGESYHYARRQFNLINDDLLR YKYLYQFDKKMLQLEITNTGEYVSLKHEGDKVLVFEKGKSVYIFNFNPTQSFVDYRIG VELPGTYKLVLDSDSEDLGGHGRLDHNTKYFTFNEPWNNRSNSLLVYIPTRTAIVLEK VE" misc_feature 19..2052 /gene="GLC3" /locus_tag="CAALFM_C603340CA" /note="1,4-alpha-glucan-branching enzyme; Region: PLN02447" /db_xref="CDD:215246" ORIGIN 1 atgtcaaaat cattaattca aggagtatta gacttagatc catggttaga accattttct 61 caaccattaa ttaatcgaca aattgaattt caaaaatggc ataaaaaatt aattgaatca 121 gaaggttcat taattgattt tgctaatagt tataaaaaat atggtgtaca tactttacct 181 tctggtgaaa ttcaaatcat tcaatatatt cctgatgttg atgaagtttc aattgttgga 241 gattttaata attggaataa agatagtcat aaattacgga aattaaatga atttggaact 301 tgggaattga ctcttaaacc aggtagtatc cccattgata gtaaatataa aattgccatg 361 aaaaccacga ccacgaccac caccaccacc accaccaaaa atggcgggga atggatttat 421 cgtttagatc catgggttca tagagctaca tttgctaaac aacatgcatt atatgaaggt 481 catttttggg aagataatta tcaatttaaa aatcctcgtc ctaaaaaaaa tattgccgca 541 ggtggtatta aaatttatga agctcatgta ggtatttcta ctccggaacc aactattggt 601 agttataaaa atttcactca aaatgtcttg ccaataattc gtgatcttgg ttataatacc 661 attcaattaa tggcaattat ggaacatgct tattatgcat catttggtta tcaagtgacg 721 agttttttcg ccatctcatc tcgatatggt acccctgatg aattaaaaga attgattgat 781 accgctcatg gaatgggaat tcaagtatta ttagatgtgg tccattctca tagttcgaaa 841 aatgtcgacg atggattaaa tatgtttaat ggtactgatc attatttatt tcatggtggt 901 agtagaggca atcatgattt atgggattct cgattattta attatacaaa ctatgaaact 961 ttaagatttt tattatctaa tttgaaatat tatattgatg ttttccaatt tgatggcttt 1021 agatttgatg gggttactag tatgctttat aaacatcatg gattatctgt tgggttcagt 1081 ggtggatatc atgaatattt tggtgatgga gtcgataatg aagctatagt ttatcttatg 1141 ttagctcatc aattaatgaa tgaaatttcc accacggaaa atttcaattt gacttcaatt 1201 gcggaagacg tttccgggat gcctacatta tgtcgtccaa tatctgatgg aggaattggt 1261 ttcaattata gattatcaat ggcaatccct gatatgtgga ttaaaatttt aaaacattta 1321 actgatgaac aatgggatct tggtaatatt gttcatacat taaccaatcg aagatatggt 1381 gaaaaagtca ttgcttattg cgaatctcat gatcaagctt tggttggaga taaaacttta 1441 gccttttggt taatggataa agaaatgtat accaatatgt cagtattatc cccattaaca 1501 ccaattattg atagaggtat tgcccttcat aaattaatcc gtttagtcac ttttgccctt 1561 ggtggtgatg gatatctcaa ttttgaaggt aatgaatttg gtcatcctga atggttggat 1621 ttccctcgtc aaggtaatgg agaatcttat cattatgctc gtcgtcaatt caatttaatt 1681 aatgatgatc ttcttcgtta taaatattta tatcaatttg ataaaaaaat gttacaacta 1741 gaaatcacca atactgggga atatgtttct ttaaaacatg aaggtgataa agttttagta 1801 tttgaaaaag gtaaatcagt ttatattttc aatttcaatc caactcaatc atttgttgat 1861 tatagaattg gggttgaatt accagggact tataaattag tattggattc tgattcagaa 1921 gatttaggtg gtcatggaag actcgatcat aatactaaat atttcacttt taatgaacct 1981 tggaataata gaagtaattc ccttttagtt tatattccaa ctagaactgc cattgtctta 2041 gaaaaagttg agtag