Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_714088 2766 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_714088 VERSION XM_714088.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2766) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2766) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2766) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2766) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2766) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2766) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714088.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2766 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2766 /locus_tag="CAALFM_C603330CA" /db_xref="GeneID:3639199" CDS 1..2766 /locus_tag="CAALFM_C603330CA" /note="Putative protein of unknown function; mutation confers hypersensitivity to amphotericin B; overlaps orf19.5621" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_719181.2" /db_xref="CGD:CAL0000196662" /db_xref="GeneID:3639199" /translation="MEINTQSNDDIDTLLKQLTPTQEHFLKKYLLEEQLSKELHNFNE PNCCQLLGYPFKSSSNKNNQNDELSSKLPLLSFFFKQFLTTFPFITNNSPKNQQDFWQ NTLQPFIESFNTKPISHSEEREEKITKRRQVNKKLLSGLLLFYNAVIITDQEINYLTE THYKPSDTGKLDKFHNKKEIITSNNSKSGSNGLNIVAVRVIYENPTNISSWIPFYNRI KVYHLFIIELQNDNQDTYYIAKSYQNFKTLHNKLKKKFPGLFTEIHLPSHKDKHDNGW EINNDKESLAYEEEEDTTSCSNEKILIREKMRLSLRGYLKSLMKIPEVAHCTILSEFL TTNKTTLTRDDIIDYNQRQEHEELMKQTQIEFQQQTTKIMLSLTKDFESFKSQLIMNP GTITQIFYELGSTPDIKQMSPLLKTFNEWCKVEIAATIYQTFISQDNSSEWFNKVKKF HRIFPHNIVYGILKYTNPMKIISRIVDLLLVNIPSFSWNSSELNDHSKKNGARNLLSM IFIMLLNEDLNGFDKELSILESNLIGYEVYLQRIKNYVQLDYKQINSIRDEQTLNNQD LLLTILSTPKLTPQVDDDDNNNKFNEIESSYHHYRNITNAEKLEESELYLNLKQYWQI QIRKRDKDLFKQLWQEPELSELIKKFLIIFYQPLMTIFTKSDVHLAFRGLQKFIDDLI ETVTKINNEEIYYLNSFEIFNKLKNLLDRHENVIWEFIHKIYIKDDQHLFLNLIKWIE KYLTMMRIKFINPEIVKINIHTPNSGGGGGGDGDNNLDKQLFMNQLNSRVQKIVTKRK LFKEYLEAKANLQQQDPNNNDIDGNWEDINNKIFGNTTSDEFGVKTDDLEEFNYLNAE NDLLNDLSKQTDLERDLLNKLHQLDQTTPGTSELDKLDITQELYQVLNRISTFETSDG MTTNMNR" misc_feature 49..438 /locus_tag="CAALFM_C603330CA" /note="PX-associated; Region: PXB; pfam12828" /db_xref="CDD:432813" misc_feature 577..1011 /locus_tag="CAALFM_C603330CA" /note="The phosphoinositide binding Phox Homology domain of uncharacterized fungal proteins; Region: PX_UP2_fungi; cd06869" /db_xref="CDD:132779" misc_feature order(721..729,805..810,919..921) /locus_tag="CAALFM_C603330CA" /note="putative phosphoinositide binding site [chemical binding]; other site" /db_xref="CDD:132779" misc_feature 1192..2241 /locus_tag="CAALFM_C603330CA" /note="Domain of unknown function in PX-proteins (DUF3818); Region: DUF3818; pfam12825" /db_xref="CDD:463720" ORIGIN 1 atggaaatta acacacaatc aaatgatgac attgacacat tattaaaaca attgactcca 61 actcaagaac attttcttaa gaaatattta ttggaagaac aattatcaaa agaattacac 121 aattttaatg aaccaaattg ttgtcaatta cttggatatc catttaaatc ttcttccaac 181 aagaacaacc aaaacgatga actaagctct aaattaccat tattatcatt ttttttcaaa 241 caatttttaa ctacattccc atttattacc aataattccc ctaaaaatca acaagatttt 301 tggcaaaata ctttacaacc atttattgaa agttttaata ctaaaccaat aagtcatctg 361 gaagaacgtg aagaaaaaat caccaaaaga cgtcaagtta ataaaaaact tttatcagga 421 ttattattgt tttataatgc cgtgattata acggatcaag aaattaatta tttgacggaa 481 actcattata aaccatcaga tactggtaaa ctagataaat ttcataataa aaaggagata 541 ataacatcaa ataatagtaa gagtggtagt aatggtttga atatagttgc tgtgagagtg 601 atttatgaaa atccaacgaa catttcatct tggatcccat tttataatcg tattaaagtt 661 tatcatttat ttataattga attacaaaat gacaaccagg atacttatta tattgctaaa 721 tcatatcaaa attttaaaac tttacataat aaattgaaga aaaaatttcc tggtctcttt 781 acagaaatac atttaccttc acataaagat aaacatgata atggttggga aatcaataat 841 gataaagaat ctttggccta tgaagaggaa gaagacacca ctagttgttc aaatgaaaaa 901 atattgattc gagagaaaat gagattatca ttacgaggat atttgaaatc gttaatgaaa 961 atccctgaag ttgcccattg tacgatcttg tcggaatttt taacaacaaa taaaaccact 1021 ctcactagag atgatattat agattataat caaagacaag aacatgaaga acttatgaaa 1081 caaactcaaa tagaatttca acaacaaact actaaaatca tgttactgtt aactaaagat 1141 tttgaatctt ttaaaagtca attgattatg aatccaggaa ccattaccca aatattttat 1201 gaattaggtt cgacccctga tattaaacaa atgtcaccat tattaaaaac atttaatgaa 1261 tggtgtaaag ttgaaattgc tgcgacaata tatcaaacat ttataagtca agataattca 1321 agtgaatggt ttaataaagt gaaaaaattc catcgtattt tccctcataa tatagtttat 1381 gggattttga aatatactaa ccccatgaaa atcatttctc gaattgttga tttattatta 1441 gttaacatcc cttcattttc ttggaatctg ctggaattaa atgatcattc taaaaaaaat 1501 ggtgctcgta atttgttatc aatgattttc attatgcttt taaatgaaga tttaaatggg 1561 tttgataaag aattgtcgat attagaatcc aatttgattg gttatgaagt ttatttacaa 1621 agaattaaaa attatgttca attagattat aaacaaatta attcgattag agatgaacaa 1681 acattaaata atcaggattt attattgact atattactga caccaaaatt gacaccacaa 1741 gtagatgatg atgacaacaa caacaaattt aatgaaattg aatcatctta tcatcattat 1801 cgaaacataa ctaatgcaga aaaacttgaa gaatcagagt tgtatttgaa tttaaaacaa 1861 tattggcaaa ttcaaatccg gaaacgtgat aaagatttat ttaaacaatt atggcaagaa 1921 ccagaattat cggaattaat taaaaaattc ttaattatat tttatcaacc attaatgaca 1981 attttcacta aaagtgatgt tcatttagct tttagaggtt tacaaaaatt tattgatgat 2041 ttaattgaaa ccgtaacgaa aattaataat gaagaaattt attatttaaa ttcatttgaa 2101 atttttaata aattgaaaaa tttattagat cgtcatgaaa atgttatttg ggaatttatt 2161 cataaaatat atattaaaga tgatcaacat ttatttttga atttaataaa atggattgaa 2221 aaatatttaa ccatgatgag aattaaattt attaatccag aaattgtcaa aataaatatc 2281 cataccccca attctggtgg tggtggtggt ggcgatggtg ataataattt agataaacaa 2341 ttatttatga atcaattgaa tagtcgagtg caaaaaattg ttacaaaacg taaattgttt 2401 aaagaatatc ttgaagcaaa agcaaattta caacaacaag acccaaacaa caatgatatt 2461 gatggtaatt gggaagatat aaataataaa atatttggta ataccacgag tgatgagttt 2521 ggggttaaaa ccgatgattt agaagaattt aattatctta atgctgaaaa tgatttatta 2581 aatgatttat ctaaacaaac tgatttagaa cgtgatttat taaataaatt acatcaatta 2641 gatcaaacta ctccagggac aagtgaatta gataaattag atataactca agaattatat 2701 caagttttaa atagaataag taccttcgaa acaagtgatg gcatgaccac caacatgaat 2761 agataa