Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_714083 810 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_714083 VERSION XM_714083.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 810) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 810) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 810) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 810) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 810) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 810) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..810 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>810 /locus_tag="CAALFM_C603280WA" /db_xref="GeneID:3639185" CDS 1..810 /locus_tag="CAALFM_C603280WA" /note="Ortholog of C. dubliniensis CD36 : Cd36_63740, C. parapsilosis CDC317 : CPAR2_503850, Pichia stipitis Pignal : PICST_32045 and Candida guilliermondii ATCC 6260 : PGUG_00070" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_719176.1" /db_xref="CGD:CAL0000199842" /db_xref="GeneID:3639185" /translation="MLLTILISLVVAIYIDLNQPNTTEISYYTTTSTNLVTPIVLTTL FNYNPKTIISINDTNSTIVPSDEILLTPNNKLSTITNLKYLELQYFNPIWQTSIIPLT PCITRQFISPNHKHIDSAPVGVILTHRTAIYSRLSLGTGFSLGEGILVNTTTLGLSLG SKITFKLTKQRMIDTTVGCYSYKDGLSARVFGYIPTLQVTPRARNILYSRKKKRVVID HAWQELKPKKIMTDSKVRTLCDVGTSEELQCNTKTGKHIDQYGNSLIWNHR" ORIGIN 1 atgttattaa ctatactcat atcattggtt gttgcaatat acatagatct taatcaacca 61 aatactactg aaatctcata ctatactact accagtacaa atttggtaac tcctatcgtg 121 cttacaactt tattcaatta taaccccaaa acaatcatat caatcaatga cacaaacagt 181 actattgttc cttcagatga gattcttctt acaccaaata ataaattatc aacaatcact 241 aatctaaaat atttggagct ccaatatttc aatccaattt ggcaaacttc tattattcca 301 ttaactccat gtataactcg ccagtttata ctgccaaacc ataaacatat tgattctgcc 361 cccgtaggag tgattcttac tcatcgtaca gctatttatc tgagacttag tttgggaact 421 ggatttagtt taggtgaagg tatattggtc aatacaacca cattaggact tagtttaggt 481 agcaaaatca cattcaagtt gaccaaacaa cgtatgatag ataccacggt aggatgttat 541 ctgtataaag atggactttc agcaagagta tttggttata ttccaacttt acaagttaca 601 ccaagagcta gaaatatatt gtatagtagg aagaaaaaaa gagttgtcat agatcatgct 661 tggcaagagt tgaaacctaa aaagataatg acagattcaa aagtgcggac tttgtgtgat 721 gtcgggactt cggaagaact ccaatgtaat acaaaaaccg gtaaacacat tgatcaatat 781 gggaactctt taatctggaa ccatagataa