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LOCUS XM_714066 3168 bp mRNA linear PLN 18-APR-2022 mRNA. ACCESSION XM_714066 VERSION XM_714066.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 3168) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 3168) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 3168) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 3168) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 3168) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 3168) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714066.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..3168 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>3168 /gene="POL5" /locus_tag="CAALFM_C603120WA" /db_xref="GeneID:3639254" CDS 1..3168 /gene="POL5" /locus_tag="CAALFM_C603120WA" /note="Putative DNA Polymerase phi; F-12/CO2 early biofilm induced" /codon_start=1 /transl_table=12 /product="DNA-directed DNA polymerase" /protein_id="XP_719159.2" /db_xref="CGD:CAL0000195410" /db_xref="GeneID:3639254" /translation="MAVSRDHYFKLGSELPKERLNAATSLISELVAADNEEEWSYALN RLLKGILTTRQSAKFGFSMALTEVVNELNNRGTLTVGKYLDLLVETTKLTSSMKGKEQ RAVLFGRLFGLQVLINSQIIILKSEPEDMLQFVEILMELSNFKNWIRETGIFTLIQFI KLLDNSNVEYSKKIYIKILNMVNNLGLNLSTEGLAIYLSIPQSAQLSQNVSNMKANWK NGDPFYKGNLPILAKVLKDVEVISDEETGDDQKKKNQQKSSWNSRLPFVWDLIVAKFN QVADDSNVEDEMQDSLVTSKKRKKTTSPKHNNKRAKIEPEYISLKEFWKVVVDETLFS EKSSNERKYWGFEIFTKFVTSLETTSSVQYLFTPNFMRCLINQHASSTRMLYKIAQQT LKTLVKTIRETKPELGPIVLSCLLDESKGGCWNFDLISKSHTIDEILQIKTNVNQYIN ILLENFTIKLQTQTTLDDTSNNNKNSNDNILKWYLDKIVSLIKHNNNNQHKLSDTILE SILTKLLQYSFFDTNDIKISKFLQSICKEKFNSILSEIITLKLSHRNYKTWSTFCYKI IDKLSQDPENKCLVEFDDEISIVKQETEELLSTIIELNTKSSDKLYIFELMFSMCLIQ LYMEDEETIQVINELKLVFENQFTTANKDDNEEDDNKVDDNLVLTEIVLSFISRKSTL FKKLSVLVWENFLCQVDEIGKLRVNEACFKLLFDVLEAKENKQGQEKLFEGDGEFQES DGDEEDEEEDEEAEEAEDNNENDSSSDIDSDSDNDSDNVSELDNNEDTITEIDKQTNL KLAQALGIPTKESGEVKFDELDDLSSDDDYESDSMDDEQMMAMDDQLSKIFKQRQDTI TNLATGNKRKLEVLEAKENMIFFKNRVLDLLETFNKVAVNSHFNLAFIEPLINLMNLT LDKNLGVKAHKLLKNKISKTKIDSEELKKYYNDDPLEYYHQLINLIEELQTKANTTQP SNQSVVQSYNQSCIIIAKNLLNLDESNMQAIVDIYCNSLKQWCLQSESKLQPSLFFDF INWVNSKKSNASHNQNQNQKQKHKS" misc_feature 121..2670 /gene="POL5" /locus_tag="CAALFM_C603120WA" /note="DNA polymerase phi; Region: DNA_pol_phi; pfam04931" /db_xref="CDD:461488" ORIGIN 1 atggcagtcc tgagagatca ttattttaaa ttgggttctg aattacccaa agaacgtttg 61 aatgcagcca ctctgttaat ttcagaatta gttgctgcag ataatgaaga agaatggtca 121 tatgcgttga atagattact taaagggatt ttaactacta gacaatcagc aaaatttggt 181 tttagtatgg cattaactga agttgtcaat gaattaaata atcggggaac tttaactgtt 241 gggaaatatt tagatttact tgttgaaact acaaaattaa ccagttcaat gaaaggtaaa 301 gaacaacgag cagttttatt tggtaggcta tttggtttac aagtattaat taattctcaa 361 attattattt tgaaaagtga accggaagat atgttacaat ttgttgaaat tttaatggaa 421 ttgagtaatt ttaaaaattg gattcgagaa actggaattt tcaccttgat acaatttata 481 aaattattag ataacagtaa tgttgaatat agtaagaaaa tttatatcaa gatattgaat 541 atggttaata atttgggatt gaatttatca actgaaggtt tagcaattta tttatcaatt 601 cctcaaagtg cccaattatc acaaaatgta tctaatatga aagcaaattg gaaaaatggt 661 gatccattct ataagggaaa tttaccaata ttagccaaag ttttgaaaga tgttgaggta 721 atcagtgatg aagaaacagg ggatgaccaa aagaagaaaa atcaacaaaa gagtagttgg 781 aattctcggt taccatttgt gtgggattta atcgttgcca aattcaatca agttgctgat 841 gattcaaatg ttgaagatga aatgcaagac ctgttggtca cttcaaagaa gagaaagaaa 901 accacatcac caaagcataa taataaacgt gctaaaatag aaccagaata tatttcatta 961 aaagaattct ggaaagttgt tgttgatgaa actttatttt cagaaaaatc atctaatgaa 1021 cgtaaatatt gggggtttga aatttttact aaatttgtca catctttaga gacaacctca 1081 ctggttcaat atttatttac accaaatttt atgagatgtt taatcaatca acatgcatca 1141 tcaacgagaa tgttatacaa gattgctcaa caaactttaa aaactcttgt taaaaccatt 1201 cgagaaacca agcctgaatt gggtcctatt gttttactgt gtttattaga tgaatctaaa 1261 ggtggatgtt ggaattttga tctaattagt aaatctcata ccattgatga aattttacaa 1321 ataaaaacaa atgttaatca atatatcaat attttattag agaattttac tatcaaatta 1381 caaactcaaa caactttgga tgatactagc aacaataata aaaattccaa tgataatatt 1441 ttaaaatggt atttggataa aattgtttcc ttaattaaac ataataacaa taatcaacac 1501 aaattatctg atactatttt ggaatctatt ttaacaaaat tacttcaata ttcatttttc 1561 gacaccaatg atattaaaat atcaaaattt ttacaatcta tttgtaaaga aaaattcaat 1621 tcaatattat cagaaattat cactttaaaa ctttcccata gaaattataa aacttggtca 1681 acattttgtt ataaaatcat tgacaaatta tctcaagatc cggaaaacaa atgtcttgtt 1741 gaatttgatg atgaaatatc tatagttaaa caagaaactg aagaattatt atccaccatc 1801 attgaattaa acaccaaatc ttcagataaa ttgtatattt ttgaattaat gttttcaatg 1861 tgtttgattc aattgtatat ggaagatgaa gagactatcc aggtgattaa tgaattgaaa 1921 ttagtatttg aaaatcaatt tactaccgcc aacaaagatg acaacgaaga agatgacaac 1981 aaagtagatg ataatttagt gttgactgaa attgtattga gttttatttc aagaaaatct 2041 actttattta aaaaattgtc agttctagtt tgggaaaact ttttatgtca agttgatgag 2101 attgggaaac tacgtgtcaa tgaagcatgt tttaaactat tatttgatgt attagaagcc 2161 aaagagaata aacaaggtca agaaaaactt tttgagggag atggggaatt ccaagaaagt 2221 gacggtgatg aagaagacga ggaggaggat gaagaggccg aagaagccga agataacaac 2281 gagaatgata gcagtagtga tattgatagt gatagtgaca atgacagcga caatgtcagt 2341 gagttagaca acaatgaaga tactatcact gaaattgaca aacaaactaa tttaaaacta 2401 gctcaagctt taggaatccc caccaaggaa tcaggtgaag ttaaatttga tgagttagat 2461 gacctttctt ccgatgatga ttatgaatct gattcaatgg acgatgaaca aatgatggca 2521 atggatgatc aattatcgaa aattttcaaa caacgacagg acacaataac taatttggcc 2581 actggtaaca aacgtaaatt ggaagtttta gaagctaagg aaaatatgat tttcttcaag 2641 aatcgagtat tagatttatt agagactttt aataaagtcg cagtaaacct gcattttaat 2701 ttggcattca ttgaaccttt gattaatttg atgaatttga cattagataa aaatttggga 2761 gttaaagctc ataaattatt gaaaaataaa atctccaaaa ctaaaattga cagtgaagaa 2821 ttaaagaaat attataatga tgatccattg gaatattacc atcaattaat caatttaatt 2881 gaggaattac aaacaaaggc aaacactaca caaccatcta atcaatcagt tgtacaaagt 2941 tataatcaaa gttgtattat cattgccaaa aacttgttga atttagatga atcaaatatg 3001 caagcaattg ttgatattta ttgcaactca ttaaaacaat ggtgtttaca atctgaaagc 3061 aaattgcaac cttctttgtt tttcgatttc atcaattggg tcaacagtaa gaagagtaat 3121 gcttctcata atcaaaacca aaaccagaaa caaaaacata aatcttag