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LOCUS XM_714063 1560 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_714063 VERSION XM_714063.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1560) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1560) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1560) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1560) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1560) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1560) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714063.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1560 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1560 /gene="SHE3" /locus_tag="CAALFM_C603100WA" /db_xref="GeneID:3639277" CDS 1..1560 /gene="SHE3" /locus_tag="CAALFM_C603100WA" /note="mRNA-binding protein that localizes specific mRNAs to daughter yeast cells and to hyphal tips; required for normal filamentation and host epithelial cell damage; ortholog of S. cerevisiae She3 but target mRNAs differs" /codon_start=1 /transl_table=12 /product="She3p" /protein_id="XP_719156.2" /db_xref="CGD:CAL0000196918" /db_xref="GeneID:3639277" /translation="MTDTPNSPSKSTTKSASSSTKVIDSLHSKIDELTDELTALKQSH QELTKKHSITAKKNDSFVDQLANAKHENDMLSALLKRKERRILDLEDQFNELTSQNES LVLSNKNMKIRCENLQSNSNANIAEFERLKISYDALIASQMEYKNHYQQELNSLQTAF DNYKLENTRRFEELQTSIVSNDKDIDTLLDSLTNKRKAMDNIYVNKNNKVLQLLGNLA HLAKLHGQDTKSQVEQNVSVIEQLLAKHPDLQEKILEKEKIEVDLAEIIAHSNDVLAN SSFDEDTTLINSPDLENNQNFNTTHSTSGSATPNSNSHSLQSKKRKNYKRNSLILKES PPIISENVPSSLPKKPQVNNNLINIPKARSKFNTPPTTPRQFTNHNNDFEVTHQWNGN NNINNHRRNNSVDSRSDNSQHRRNNSYDSRSDHGQHRRQPSQQNNNYNNNNYNNNNNN NNNNSNNGFVKRSGSVRNVNNYNNNNGNANNNGNNHGNKSKRRSTYNNNNNNNSKRNS QLFDNNFVLNV" misc_feature 64..783 /gene="SHE3" /locus_tag="CAALFM_C603100WA" /note="SWI5-dependent HO expression protein 3; Region: SHE3; pfam17078" /db_xref="CDD:293683" ORIGIN 1 atgacagata ctccaaactc cccactgaag agtacgacaa agtctgccag ctcatccact 61 aaagttattg attctttaca ttccaaaata gatgaattaa ctgatgaatt aactgcgtta 121 aagcaatcac atcaagagtt gacgaaaaaa cattccatta cagctaagaa aaatgattcc 181 tttgttgatc aattagctaa tgccaaacat gaaaatgata tgttatcggc gttattaaaa 241 agaaaagaac gtcgtatttt ggatttagaa gaccaattta atgagttaac tagtcaaaat 301 gaaagtttgg tgcttagcaa taagaatatg aaaattagat gtgaaaattt acaatccaac 361 tctaatgcta atattgctga atttgaaaga ttgaaaatca gttatgacgc gttgattgct 421 tctcaaatgg agtataagaa tcattatcag caagaattaa acagtttaca aactgctttt 481 gataactata aattggaaaa cactagacga tttgaggaat tacaaacttc tattgtcagt 541 aatgataaag atattgacac tttattggat tctttaacca acaaacgtaa ggctatggac 601 aatatttatg tcaataaaaa taacaaagta ttacaattgt tgggaaattt agctcatttg 661 gccaaattac atggacaaga tactaaatct caagttgaac aaaatgtaag tgttatagag 721 caattattgg ctaagcatcc tgatttgcaa gaaaagatat tggaaaagga aaaaattgaa 781 gttgatttag ctgagattat agctcatagc aatgatgtgt tagcaaatag ttcattcgac 841 gaggacacaa ctttaatcaa ttctccagat ttggaaaata accaaaattt caatactact 901 cacagcactt ctggttcggc tactcctaac agcaacagtc attctttaca atcgaaaaag 961 agaaagaact ataaacgtaa ttccttgatt ttgaaagaac tgccaccaat catactggaa 1021 aatgttccaa gttctttacc aaagaagcct caggttaata ataatcttat caacatacct 1081 aaagctagat ccaagtttaa taccccacca acaacaccta gacaatttac aaaccacaat 1141 aacgactttg aagtaacaca tcaatggaat ggcaacaata acatcaataa ccatcgtcgt 1201 aacaacagtg ttgattctag atcagataac agtcaacatc gtcgtaacaa tagctacgat 1261 tccagatcag atcatggcca acaccgtcgt caaccaagtc agcaaaataa taactacaac 1321 aacaacaact acaacaacaa caacaataat aataacaata acagtaataa tggttttgtt 1381 aaacgaagtg gttctgttag aaatgttaac aattataaca acaataatgg gaatgctaac 1441 aataatggta acaaccatgg gaataaatct aaaagaagat cgacctataa taacaacaac 1501 aacaacaata gcaaaagaaa ttcgcaactt ttcgataata actttgtatt aaatgtatag