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LOCUS XM_714055 2949 bp mRNA linear PLN 18-APR-2022 5-phosphatase (CAALFM_C603040CA), partial mRNA. ACCESSION XM_714055 VERSION XM_714055.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2949) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2949) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2949) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2949) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2949) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2949) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714055.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2949 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2949 /locus_tag="CAALFM_C603040CA" /db_xref="GeneID:3639269" CDS 1..2949 /locus_tag="CAALFM_C603040CA" /note="Ortholog(s) have phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity, role in phosphatidylinositol dephosphorylation and PAS complex, cytosol, fungal-type vacuole membrane, nuclear periphery localization" /codon_start=1 /transl_table=12 /product="phosphatidylinositol-3,5-bisphosphate 5-phosphatase" /protein_id="XP_719148.2" /db_xref="CGD:CAL0000199050" /db_xref="GeneID:3639269" /translation="MNLNVPKTDSNGQDKFHQKFESMPKPTAVTAASSNSDQNTTLQH PKDKQQEQQVNKSSHSNEDTNFIKDNNKTQQQDPQQNGQQYINQDEQTQQNHSDQSRE RGNENEEQQDDYGDASESNKRIILQRFTIYNATTTMYIVGSNSKESLFRIMEISKDEE NDNVVSIIEDSNYFYTRKDMIELLNGLDESIEGGIHKVAQGYGMLGLIRFTQSYYLCL ITKCSQVAILGGHFIYHIDETKLIPLGTNYKRPEKYSDEERLLSIFKYMDLGKTFYFS YSYDITNTLQTNFVRNKKKATDLQFGVNTNKVNDLFNNFEHNERFVWNNLLLKPILDN PEVATYEWFQPIIHGFIDQANISVYGRKFYITIIARRSHHFAGARFLKRGVNDKGNVA NEIETEQIVSDMLITSFHDPKYGFYNNPRYTSFVQHRGSIPLYWTQDMNKLPKPPIQI NLNDPFYQSSALHFNDLFHRYGSPIIVLNLIKQKEKQPRESKLNHYFMACIKYLDQFL PEGKKIQYFSFDMSRHSKKNLDVIGPIQAIAANAMSQIGFFHNGINLSTTKLQKGIIR TNCIDCLDRTNAAQFIICKEALTHQLRSLKIISETQNLDYDSDLINVVTEIFHDHGDT IAIQYGGSNLVNTMDSYRRINQWSSHTRDMLNSIKRMYSNSFMDSIRQEAINLFLGNY IYEPDKPKLWELQNDYALHNDYSGNGLHGPHKSYINWYNEAFLLDSRYSFSGNECNEV LRLEAFPDCNEKWFNECYIPRKYQSFTELFQFNMNSNSRYFPPTENTENGNKFDYSPF ESRRKKYKTFEHESKAKLEIKTPRSKRIQKFLPFKNDHNNTSSLISSKRNLDLIEDND EEDRSITPDPDQANSIVTVNEKDIELYNSQWDYDKIIKHQTINTQDYSFNPRVKTNIE DKEIYWYYSNEIFSKLRNGSDGAGAARREDLISPQDLKTYLTFDSIDNEMITNFNNQL DLNTDNNYFF" misc_feature 604..1578 /locus_tag="CAALFM_C603040CA" /note="SacI homology domain; Region: Syja_N; pfam02383" /db_xref="CDD:460545" ORIGIN 1 atgaatctta atgtgccgaa gactgacagc aatggacaag ataaatttca ccagaagttt 61 gaatcaatgc caaagcccac tgctgtaact gcagctagtt ctaactcaga tcaaaataca 121 actttacaac acccgaaaga taaacaacaa gaacagcaag tgaacaaact gctgcatagt 181 aatgaagaca caaattttat aaaagacaat aacaagacac aacaacaaga tccacagcaa 241 aatggacaac aatacataaa ccaagacgag caaactcaac aaaaccatct ggatcagagc 301 cgagaacggg gtaatgagaa tgaagaacaa caagacgatt atggggatgc atctgaaagt 361 aataaacgta tcatattgca aaggttcaca atttacaatg ccacaactac aatgtacata 421 gttggaagta actcaaaaga aagtcttttt cgtattatgg aaatcagcaa agacgaagaa 481 aatgataatg ttgtttccat tattgaagat agtaattatt tttacaccag gaaagatatg 541 attgagttat taaatggatt agatgagtct attgaaggag gtatacacaa ggttgcacaa 601 gggtacggga tgttaggatt aattagattc actcagagtt attacttgtg tttaatcaca 661 aaatgttctc aagttgctat tttgggtgga catttcattt atcatataga cgaaaccaaa 721 ttaattccat taggaacaaa ctataaacgg ccagaaaaat atagtgatga agagagattg 781 ttatctattt tcaagtatat ggatttgggg aaaacttttt atttcagtta tagttacgac 841 atcaccaata ctttacaaac caattttgtc cggaataaga aaaaggcaac tgatcttcaa 901 tttggagtaa acactaataa agtaaatgac ttgttcaata actttgaaca taatgaaaga 961 tttgtatgga acaacttgtt gttaaaacct atactagaca atcctgaagt ggccacatac 1021 gaatggttcc aaccaattat acacggattt atagaccagg ctaatatttc agtttatggg 1081 agaaagttct atataactat aatagcgaga aggtctcatc attttgctgg agcacggttt 1141 ttgaaaagag gagtcaatga caaaggtaat gttgccaatg aaattgaaac agaacaaata 1201 gtcagtgaca tgctaattac atcgttccat gacccaaaat atggcttcta caacaaccca 1261 cgatacacta gttttgttca gcatcggggg tctataccat tatattggac tcaagacatg 1321 aataaacttc cgaaaccacc tatacagatt aatttgaatg atccatttta tcaaagctca 1381 gcattgcatt tcaacgattt gtttcaccga tatgggctgc caataattgt gttaaacttg 1441 attaaacaaa aggaaaagca accacgagag ctgaaattaa accactattt catggcttgc 1501 ataaaatatc ttgatcaatt tttacctgaa ggtaagaaaa tccaatattt tagctttgat 1561 atgtctagac attctaagaa aaacttggat gtgattggac caatacaagc tatagcagct 1621 aatgcgatga gtcaaattgg atttttccat aatgggatca atttgtctac tacaaaacta 1681 caaaagggga ttataagaac aaattgcata gattgtttgg acagaactaa tgcagcacaa 1741 tttattattt gtaaagaagc attaactcat caactacgga gtttgaagat tatttcggaa 1801 acccaaaact tggactatga ttcagatttg atcaatgtgg ttacagaaat atttcatgat 1861 catggagata ctattgccat tcaatatggt ggctcaaact tggttaacac gatggactct 1921 tatcgacgga tcaatcagtg gtcttcgcat acaagagata tgttgaatag tattaaacgg 1981 atgtattcta attcatttat ggactctata cgtcaagaag caataaattt gtttttgggg 2041 aattatattt atgaacctga taaacccaaa ttatgggaat tacaaaatga ttatgctctt 2101 cataatgatt attcaggtaa tgggttacat ggtcctcata aaagttatat taattggtat 2161 aacgaagcat ttttattgga ttcacgatat tctttctcag ggaatgagtg taatgaagtt 2221 ttacgattag aagcatttcc tgattgtaat gagaaatggt ttaatgaatg ttatatccca 2281 agaaaatatc aatcatttac agaacttttc caattcaata tgaactcaaa ctcaagatat 2341 ttcccaccta ctgagaatac tgagaatggt aataaatttg attacagccc ttttgaatct 2401 cggaggaaga aatataagac ttttgaacac gaatcaaaag ctaaacttga gatcaaaaca 2461 ccacgttcta agcgaattca aaaattctta ccattcaaaa atgaccacaa taataccagt 2521 agtctaatca gtagcaaaag aaatcttgat ttaattgaag ataatgatga ggaggacaga 2581 tcaattacgc ctgatccaga tcaagcaaat tctattgtca ctgtgaatga aaaagatatt 2641 gaattataca attcacaatg ggattatgat aaaatcatta agcatcaaac aattaatact 2701 caagattatt catttaatcc tcgagttaaa acaaatattg aagataaaga aatttattgg 2761 tattacagta atgaaatttt ttctaaactt agaaatggta gtgatggtgc tggtgctgcc 2821 cgtcgggaag atttgattag tcctcaagat ttgaaaacat atttgacttt tgatagtatt 2881 gataatgaaa tgataacaaa ttttaataat caattagatt taaataccga caataattat 2941 ttcttttaa