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LOCUS XM_714035 1362 bp mRNA linear PLN 18-APR-2022 (CAALFM_C602900CA), partial mRNA. ACCESSION XM_714035 VERSION XM_714035.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1362) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1362) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1362) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1362) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1362) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1362) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714035.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1362 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1362 /locus_tag="CAALFM_C602900CA" /db_xref="GeneID:3639240" CDS 1..1362 /locus_tag="CAALFM_C602900CA" /note="Ortholog(s) have role in protein lipoylation and mitochondrion localization" /codon_start=1 /transl_table=12 /product="putative lipoate--protein ligase" /protein_id="XP_719128.2" /db_xref="CGD:CAL0000187056" /db_xref="GeneID:3639240" /translation="MFLRRALPRNLLLIQRRRISNVNVPFEDDLTGFEDDSLADFQHY PGLQQSTPVDQNNTPSTKTDKTIAQAPLQETTIIPQLSKISQLRNPVIFVSKLTNPYM NLAIEDYIYNAMPKPEGAKDNSFDRLMFYINTPCVVIGKNQNPWQEVNLPVLNSLGVP MLRRRSGGGTVVHDLGNVNYSYMTTKANFDRHKFASYIVEAVNQASPRFKIETNERGD IVSEKLLGLNYKISGSAYKLSKGKSYHHGTMLLNSKLDVLGKLLHRDEKKLGIVDSKM SIPSVKSKVINLEMKSDKFIDVVSQKFKSLYNVVPEEDTEMDEFNEMFGLTDFAKSQE VTLFVIDEATTIPEEIHITADELKQWSWRFGHTPKFTHSFKNQKHGLEILFNVEKGCL KSFKLTFDDSNSDTKEIEKSFQYLESHIKNNDLEYTGSNVAGFVLHDEISDWIGESID GTI" misc_feature 274..1251 /locus_tag="CAALFM_C602900CA" /note="biotin-lipoate ligase family; Region: BPL_LplA_LipB; cl14057" /db_xref="CDD:449326" misc_feature order(391..393,490..492,505..519,529..531,535..537, 646..648,688..702,736..744,748..750) /locus_tag="CAALFM_C602900CA" /note="active site" /db_xref="CDD:319742" ORIGIN 1 atgtttctac gaagagcttt acctagaaac ctattactta tacagagaag aagaatatca 61 aatgttaatg ttccctttga ggatgatttg acaggattcg aagacgacag tttggcagat 121 tttcagcatt atccaggttt acaacagtca acaccggtcg accagaataa tacaccaagc 181 actaaaacag acaagacaat cgcacaagct cccttgcaag agacaactat tattcctcaa 241 ttgtctaaaa ttagtcaact aagaaaccca gtgatttttg tatctaaatt gacaaatcct 301 tatatgaatc ttgctatcga agattatatt tacaatgcca tgcctaaacc agaaggtgcc 361 aaagataatt catttgatcg gctaatgttc tatataaata ctccatgtgt agtaattgga 421 aaaaatcaaa acccttggca agaagttaat ttaccggtat tgaattcttt aggggtcccc 481 atgttaagaa gacggtccgg tggaggaact gttgttcatg atttaggaaa cgtgaattat 541 tcatacatga ccacgaaagc taattttgat agacacaagt ttgccagtta tattgtggag 601 gcagtgaacc aagctagtcc acgttttaaa atagaaacta atgaacgtgg tgatattgtt 661 agtgaaaaac tcttagggtt gaactataaa ataagtggat cggcttataa gttatcaaag 721 ggaaaatcct accatcatgg aaccatgtta cttaatctga agttagatgt attaggtaaa 781 ttattacatc gtgatgaaaa aaaattaggc attgttgatt ccaagatgtc tataccttca 841 gtcaaatcca aagtcattaa tttggaaatg aaaagtgata aatttattga tgttgttagt 901 caaaaattta aaagtcttta caatgtggtt cctgaagagg atacagaaat ggatgagttt 961 aatgagatgt ttggattgac tgattttgcc aagtcacaag aagttacatt gtttgttatt 1021 gatgaggcaa caacgatacc ggaagaaatc catataactg cagatgaatt aaaacagtgg 1081 tcatggaggt ttggtcacac tccgaaattt acacattcat tcaaaaacca aaagcatggg 1141 cttgaaatat tattcaatgt tgagaaaggg tgtcttaaat cattcaaact aacatttgat 1201 gattctaact ctgatactaa agaaattgaa aagtctttcc aatatttgga gtcacatatc 1261 aagaataatg atttagagta tactggtagt aatgtagccg gatttgtact tcatgatgag 1321 ataagtgact ggataggtga atctatagat ggcacaatat aa