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LOCUS XM_714029 1068 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_714029 VERSION XM_714029.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1068) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1068) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1068) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1068) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1068) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1068) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714029.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1068 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1068 /gene="RAV2" /locus_tag="CAALFM_C602850WA" /db_xref="GeneID:3639252" CDS 1..1068 /gene="RAV2" /locus_tag="CAALFM_C602850WA" /note="Protein similar to S. cerevisiae Rav2; a regulator of (H+)-ATPase in vacuolar membrane; transposon mutation affects filamentous growth" /codon_start=1 /transl_table=12 /product="Rav2p" /protein_id="XP_719122.2" /db_xref="CGD:CAL0000180766" /db_xref="GeneID:3639252" /translation="MTANILNNKTFIDTVLSIQSTQNDKELHWYIINIILPDLPQIIE TLQICSNLLMYNSPQEPDSKQCIEKGPSIKLPLSLTNQQDSVNGIITRDGPYITDLNL TVKNHYFNKHFHKLRLIKPMVLEQLVNVLNLIKDSIGILQNLQSIDKELTLLSEKEEN EHTIKHDQLICDFKKLLVNIHDSKTNLQLPSDPNLVFPLQVTDGENFEPQLSDRIAVD FYLSQNQVCIDLKSLHRITEKPWCEIDANGKSFVDKLKEEMKNKRSSIGDKSTSDAIN QNNNTNIFSNMMSHLSLRHKYDTMDYITRCITYNNMVVVVNKKFEVSTEDPILISCFT KLDSLESIINGYISSLNSFSM" misc_feature 76..1053 /gene="RAV2" /locus_tag="CAALFM_C602850WA" /note="Rogdi leucine zipper containing protein; Region: Rogdi_lz; pfam10259" /db_xref="CDD:463031" ORIGIN 1 atgacagcaa atatcttgaa taataaaaca ttcatagata ctgtattatc aatacaatca 61 actcaaaatg ataaagaatt acattggtat attataaata taattttacc cgatttacct 121 caaatcatag agactttaca gatttgttca aatttgttga tgtacaattc accacaagaa 181 cctgattcca aacaatgtat tgaaaaaggt ccatctatca agctaccttt gtctttaacc 241 aatcaacaag attctgtcaa tgggataata acccgagatg gaccatatat cacagatctt 301 aatttgacgg ttaagaatca ttatttcaac aagcatttcc ataagttgcg cttaataaag 361 ccaatggttt tagaacaact tgttaatgtg ctaaatttga ttaaggattc gattggcata 421 ctacagaatt tacaatcaat agataaagag ttgacattat tgtcagagaa agaagaaaac 481 gaacatacta tcaaacacga tcaattgata tgtgatttca agaaactttt ggttaatatc 541 catgattcaa agacaaattt gcaacttcca tcagatccca acttggtttt ccccttgcag 601 gtaaccgatg gagagaattt tgaaccccag ttactggatc gtatagcagt ggacttttat 661 cttagtcaaa accaagtttg tattgatttg aaaagtcttc acagaataac agaaaagcca 721 tggtgtgaaa ttgatgctaa tggtaaatcg tttgtcgaca aattgaagga agaaatgaaa 781 aacaagagac tgtcaattgg tgataaatct acgtccgacg caatcaatca aaataacaac 841 accaatatat tttctaacat gatgagtcac cttctgttga gacacaagta tgatacaatg 901 gattatataa cccggtgtat cacctataat aatatggttg tggtagtcaa taagaagttt 961 gaagtatcta cagaagatcc aatcttgatt agttgtttta caaagttaga ttctttggaa 1021 agtattatca atggatacat ttctagcttg aatagttttt caatgtaa