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LOCUS XM_714011 1935 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_714011 VERSION XM_714011.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1935) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1935) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1935) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1935) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1935) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1935) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714011.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1935 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1935 /locus_tag="CAALFM_C602690CA" /db_xref="GeneID:3639228" CDS 1..1935 /locus_tag="CAALFM_C602690CA" /note="Protein with similarity to S. pombe Nrd1p; transcription induced upon induction of hyphal growth; regulated by Cph1p, Efg1p, Cph2p; low-level expression; alkaline upregulated; fungal-specific (no human or murine homolog)" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_719104.1" /db_xref="CGD:CAL0000201649" /db_xref="GeneID:3639228" /translation="MSFYPSQQPDPNEDMMMDHNQYQMYQQQNSQPMPQQSQIPMAGQ IPQYSQFAPEHLFQQQQQQQGSEGFDGMNFVPPSQFNDFSNGGVGGYPQYEQQLFQQQ QQQPQPFHQSEFQQPDFGVGMIPQHDQSQQQQHQQQQHQQQQGLPGMVGAPGQEAGNS RTVYLGNLPNDLEPHELLDYVRSGIIENVRIIPGKNCCFISFLDTNAALLMHSEFILK KINIKGYNIRVGWGKNTTIQPGVLQAVTNDGATRNVYLGNLSPSDISEEEIINDLSIY GPIECIKTIPEKGIAFVHFLSIASAIRCVNNLQSEKYPKVYYGKDRCAFITKTQQHNA AQYLGLAPGMEHIVTAADREFISSALVQQSAAAAQIATQAGGANNLGNRTVYLGNLHQ DSSIEEICNVVRGGLLQSVRFLKERHVCFITFIDPIAAAQFFAMCQLHGLTIHNRRIK VGWGKHSGPLSNALSLAVSNGASRNIYIGNIVDFEYFNPAKLREDFTKFGDIEQINYL EEKNCAFINFINIANAIKAIDGIKSFEDYKNLKINFGKDRCGNLPRQFQNQLPLSTSL SSSSPSPAQNQSSAGVPPAFANDHDEDNNNQSLSTPQAEISSASPSSTTDIKSEALPI GGGALGIIEDGEFYKESTPF" misc_feature 478..699 /locus_tag="CAALFM_C602690CA" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" misc_feature 745..972 /locus_tag="CAALFM_C602690CA" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" misc_feature 1144..1365 /locus_tag="CAALFM_C602690CA" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" misc_feature 1411..1653 /locus_tag="CAALFM_C602690CA" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" ORIGIN 1 atgtcttttt acccgtcgca acagcctgat cctaatgagg atatgatgat ggatcataat 61 caatatcaaa tgtatcaaca acaaaactct cagcccatgc cacaacagct gcaaatacca 121 atggcaggac aaattcctca atatagtcaa tttgcaccag aacacctttt tcagcagcaa 181 caacaacaac agggtagtga agggtttgat gggatgaatt ttgtaccacc gtctcaattt 241 aatgatttta gtaatggggg cgttggtggc tatccacaat atgaacaaca gctttttcaa 301 caacaacagc agcaaccaca gccattccat caatcagaat ttcaacagcc agattttgga 361 gtaggaatga tcccacaaca tgatcaactg caacaacagc agcaccaaca gcaacagcac 421 caacaacagc aaggattacc tggtatggtt ggtgctcctg gacaagaagc tggtaactca 481 aggacagttt atcttggtaa tttacctaat gatcttgaac ctcatgaatt acttgattat 541 gttcgttcag gaataattga aaatgttcga attattcctg ggaaaaattg ttgttttatc 601 agttttttgg atactaatgc tgccttattg atgcatagtg agtttatttt gaaaaagatc 661 aacatcaaag gttataatat tcgtgttgga tgggggaaaa ataccactat tcaaccagga 721 gttttacaag cagttactaa tgatggagcc acgagaaatg tttatttggg taatttatct 781 ccgctggata tatctgaaga agaaattatt aatgatttga gtatttatgg tccaattgaa 841 tgtattaaaa ctattccaga aaagggtatt gcatttgttc attttcttag tattgcctcg 901 gctattcgtt gtgttaataa tttacaatca gaaaaatatc ctaaagtgta ttatggtaaa 961 gatcgttgtg catttatcac taaaactcaa caacataatg ctgctcaata tttaggattg 1021 gctcctggta tggaacatat tgttactgct gctgatcgag aatttatttc tctggcatta 1081 gtacagcaat cagctgctgc tgcacagatt gctactcaag caggtggagc taataatttg 1141 gggaatcgta cggtttattt gggtaattta catcaagatt cttcaattga agaaatttgt 1201 aatgttgttc gcggtggatt attacaaagt gttcgatttt taaaggaacg tcacgtttgt 1261 tttattacat ttattgatcc aatcgctgct gcccaatttt tcgccatgtg tcaattacat 1321 ggattaacaa ttcataatcg tcgtattaaa gttggttggg gtaaacattc tggtccatta 1381 tccaatgcct tatcgttggc agtatccaat ggagcttcaa gaaatattta tattggtaat 1441 attgttgatt ttgaatattt caacccagct aaattaagag aagatttcac taaatttgga 1501 gatattgaac aaatcaatta tttagaagag aaaaattgtg cattcattaa tttcattaat 1561 attgctaatg ctattaaggc aattgatgga attaaatcat ttgaagatta caaaaatttg 1621 aaaatcaatt ttggtaaaga tagatgtggt aatttacctc gtcaattcca aaatcaatta 1681 cctttgtcaa cttcattatc atcttcatct ccttcaccag cacaaaacca atcttctgct 1741 ggtgtaccac cagcatttgc taatgatcat gacgaggata ataataatca atctttactg 1801 accccacaag cagaaatctc actggcatca ccttcatcaa cgaccgatat aaaatctgaa 1861 gctttaccta ttggtggtgg agcattagga attattgaag atggagaatt ctataaggag 1921 tctacgccat tttaa