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LOCUS XM_714009 843 bp mRNA linear PLN 18-APR-2022 mRNA. ACCESSION XM_714009 VERSION XM_714009.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 843) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 843) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 843) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 843) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 843) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 843) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714009.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..843 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>843 /locus_tag="CAALFM_C602680WA" /db_xref="GeneID:3639226" CDS 1..843 /locus_tag="CAALFM_C602680WA" /note="Ortholog(s) have SNAP receptor activity, role in retrograde vesicle-mediated transport, Golgi to ER and SNARE complex, integral component of cytoplasmic side of endoplasmic reticulum membrane localization" /codon_start=1 /transl_table=12 /product="SNAP receptor" /protein_id="XP_719102.2" /db_xref="CGD:CAL0000198891" /db_xref="GeneID:3639226" /translation="MPLTSIHTIESILSQINKDVQELDIPSIYQLSTTTTTANTIPKT SPYITRFKLLQIKNSLTNLNDQFHANFTSSNNKHYHNVKQTLDKLYINEIDEKLYIVD KLITQYDDANSPTTLNGDDQQQQNQQGEQNLQRGNSGVITNDEELSSLRQRLLSSSKL HQINQDNTSESDSTKLNEYHESIQDDIVNELSELTSTLKSKAIEFSNKLLNQDSDILQ QTHDNLSINRTMFDTLNKNLNDYLLNKTGWSISIWTLLKFAVALIVIFVVMLLFIIIV PRIR" misc_feature <448..819 /locus_tag="CAALFM_C602680WA" /note="Membrane fusion protein Use1; Region: Use1; pfam09753" /db_xref="CDD:462882" ORIGIN 1 atgcccctaa catctataca tacaatagaa tcaattcttt cacaaataaa caaagatgta 61 caagaattag atattccaag tatatatcaa ctttccacaa caacaacaac agccaatacc 121 attcctaaaa catcaccata tatcacacga ttcaaattac tccaaatcaa aaactcatta 181 actaatttaa atgaccaatt tcatgcaaat ttcaccagca gtaataataa acattatcat 241 aatgtaaaac aaacactaga taaactatac attaatgaaa ttgatgaaaa attatatatt 301 gttgataaat taatcactca atatgatgat gccaattcac caaccacatt aaatggtgat 361 gatcaacaac agcaaaatca acaaggagaa caaaatctac aacgtggtaa tagtggagtt 421 attactaatg atgaagaatt atcatcttta cgtcaacgtt tattatcatc atctaaatta 481 catcaaatta atcaagacaa cacgagcgaa agtgattcta ccaaattgaa tgaatatcat 541 gaatcaattc aagatgatat agttaatgaa ttgagtgaat taacatcgac attaaaatct 601 aaagctattg aatttagtaa caaattattg aatcaagatt ctgatatatt acaacaaact 661 catgataatt tatcaattaa tcgaacaatg tttgatactt taaataaaaa tttaaatgat 721 tatttactta ataaaactgg ttggagtata agtatttgga cattattgaa atttgccgtg 781 gctttgattg ttatatttgt tgttatgttg ttatttataa ttattgttcc tagaattcga 841 taa