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LOCUS XM_714007 1719 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_714007 VERSION XM_714007.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1719) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1719) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1719) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1719) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1719) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1719) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_714007.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1719 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1719 /locus_tag="CAALFM_C602660CA" /db_xref="GeneID:3639224" CDS 1..1719 /locus_tag="CAALFM_C602660CA" /note="Has domain(s) with predicted carbon-nitrogen ligase activity, with glutamine as amido-N-donor activity" /codon_start=1 /transl_table=12 /product="putative amidase" /protein_id="XP_719100.2" /db_xref="CGD:CAL0000188222" /db_xref="GeneID:3639224" /translation="MTITHQHPVYKDIAAKKKSIRDDKFNPEWLIPQHELPDDEVTDV LNWIKKTNHLTPEEIIITESKAVDIVNNIKSQTWTSLEVTLAFCHRASIAHQLTNCLT EIFFDEAIKRAKELDHYQLVSPGGGKLAGPFHGLPISLKDNFNVKGHGTTLGMVNFCF NPQQVEYDSTLVEMLRQLGAILYVKTNVPVAMMMPETTNHVWGSTVNPMNRLLSCGGS SGGESALIKLKGSPIGIGSDIGGSIRIPASFQNLYAIKPSFGRFPTFGTRSGLPGLES VNSVNGPISNSLDDLEFYCKTIIDAKPWLSDAKCIEIPWRQVEFGNDSIDREKVNGNS ASSQASPKLNIAILMDDGFVRPTPPIRRGMEIVTEALKKDGHHLIEWDPQDHVRLSEI IGQFFVSDGGHHVLEETTVVNEPFFPYMENYGTSKDIPVSQLWQLQRERTVLIDKYLK RWNSTADITTNGKPIDAIIMPATPFAGNPLGKFPTYVGYTSPFNALDYTVGVFPVTRV DKTVDVGDEAPGNYNEIDVQVWKDYDPEESHGGAVALQLVARRFEEEKVIAMMKIISE LINYTD" misc_feature 244..1665 /locus_tag="CAALFM_C602660CA" /note="Region: Amidase; cl18951" /db_xref="CDD:450241" ORIGIN 1 atgactataa cacaccaaca cccagtttat aaagatattg cagctaagaa aaaatctatt 61 cgtgacgata agtttaatcc tgaatggttg attccacaac acgaattgcc cgatgatgaa 121 gttactgatg ttttaaactg gattaaaaag acaaaccatt taactccaga ggaaataatt 181 ataactgaat cgaaagcagt tgacattgtc aataatatta aatcacaaac ttggacatct 241 ttagaagtca cattagcatt ttgtcatcgt gcctcaattg cccatcaatt gactaattgt 301 ttgacagaaa ttttttttga cgaagcaatc aagagagcaa aagagttaga ccactatcaa 361 ttggtttcac ctggtggcgg taaacttgct ggtccctttc acggtttacc tatttcatta 421 aaagacaatt tcaatgttaa gggccatggt actactttgg gtatggtaaa tttttgtttt 481 aatccacaac aagttgagta tgattctaca ttagtagaaa tgctccgcca attaggtgca 541 atattatatg tgaaaacaaa tgtccctgtg gctatgatga tgcctgaaac cacaaatcat 601 gtttggggca gtaccgtaaa tccaatgaat cgattattaa gttgtggtgg ttcactgggt 661 ggtgaatcag cattaattaa attaaaaggc tcaccaattg gtattgggct ggatattggt 721 gggtctattc gtatcccggc atctttccaa aacttgtatg ctatcaaacc ttcattcggt 781 agatttccta catttgggac tcgttcaggt ttaccagggt tagagtcagt caatagtgta 841 aatggtccaa ttagtaatag ccttgatgat ttagagtttt actgcaagac aataatcgat 901 gctaaaccct ggttgagtga tgctaaatgt atcgagattc cttggcgaca agttgagttt 961 ggcaatgact ctattgatag agaaaaagtc aatggcaaca gtgcttcgtc acaagcatct 1021 ccaaaattga atattgccat attaatggat gatgggtttg ttcgaccaac tcctccaata 1081 cgtcgtggaa tggaaattgt tactgaagca ttgaaaaaag atggtcatca tttaattgaa 1141 tgggatcctc aagatcatgt tcggttatca gaaatcattg gtcagttttt cgttagtgat 1201 gggggtcacc acgttttgga ggaaactact gtggtaaatg agccgttttt cccatatatg 1261 gaaaactatg gaaccagtaa agatattccc gtgtctcagt tatggcaatt acaacgtgaa 1321 agaacagttt tgattgataa atatcttaaa cgatggaatt ccactgctga tattactacc 1381 aatgggaagc caattgatgc tattatcatg cctgcaactc catttgctgg caatccgtta 1441 gggaaattcc ccacatatgt tggctacaca tccccattta atgctcttga ttatactgtt 1501 ggtgtgttcc cggtgaccag ggtcgataaa actgtggatg ttggtgatga agctcctgga 1561 aattacaatg aaattgatgt ccaagtctgg aaagactatg atcctgaaga aagtcacggt 1621 ggtgctgttg ctttacaatt ggttgcaaga agattcgaag aggaaaaagt aattgctatg 1681 atgaagatca tttcagagtt aattaactat actgattaa