Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_713991 1185 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_713991 VERSION XM_713991.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1185) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1185) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1185) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1185) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1185) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1185) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_713991.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1185 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1185 /gene="GCV1" /locus_tag="CAALFM_C602500CA" /db_xref="GeneID:3639172" CDS 1..1185 /gene="GCV1" /locus_tag="CAALFM_C602500CA" /note="Putative T subunit of glycine decarboxylase; transcript negatively regulated by Sfu1; Spider biofilm repressed" /codon_start=1 /transl_table=12 /product="glycine decarboxylase subunit T" /protein_id="XP_719084.2" /db_xref="CGD:CAL0000177615" /db_xref="GeneID:3639172" /translation="MLRITSKRLYSSTSNLLKTPLHEAHIELGGKMVPYAGFEMPVLY KGQSHIESHNWVRSKVGLFDVSHMLQHNISGKDAQSLLQKITPIDLSKLPVNTSSLSV LLNNNGGVIDDCIITKHGEDEYYMVTNAGCREKDVKFIKDEASQFNSVNHNTFEGTLL AIQGPKAQEILQQFTNEDLSKIYFGQTKFLKLSPIGATVYLARSGYTGEDGFELSIPS TTPEESKQALDFFYTLINEYPDVVKPIGLAARDSLRLEAGMCLYGHELTEEITPIEAS LTWLIPKTRRDENNDFNGASKILSQIKDKSSFTHRRIGLTSKGPSPRDGNKIFNEDGT VEIGYVTSGSPSPTLGGNIAQAYIDKKHKIGSNVKIEIRNKLRDAVITKLPFVPSNLY KP" misc_feature 7..1182 /gene="GCV1" /locus_tag="CAALFM_C602500CA" /note="glycine cleavage system aminomethyltransferase GcvT; Region: gcvT; cl39066" /db_xref="CDD:476863" ORIGIN 1 atgttaagaa ttacttctaa aagattatac tcatcaacta gcaacttatt gaagactcca 61 ttgcatgaag ctcacataga attaggtggt aaaatggtac catatgctgg tttcgaaatg 121 ccagtattgt ataaaggtca atctcatatt gaatctcata attgggtgag atcaaaagtt 181 ggtttatttg atgttagtca catgttacaa cataacatta gtggtaaaga tgctcaaagc 241 ttgttacaaa aaataactcc tattgattta agtaaattac cagttaacac atctagctta 301 tcagtgttat taaataataa tggtggagta attgatgatt gtattatcac caaacacggt 361 gaagatgaat attatatggt cactaatgct ggatgtcgtg agaaagatgt caaatttatt 421 aaagacgagg ctagccaatt taatagtgtt aatcacaata cgtttgaagg aacattatta 481 gctattcaag gtcctaaagc acaagaaata ttacaacaat ttaccaatga agatttatct 541 aaaatttatt ttggtcaaac caaattcttg aaattatcac caattggggc aacagtttat 601 ttggctagat ctggttatac tggagaagat ggatttgaat tatcaatccc atcgactaca 661 ccagaagaat caaaacaagc attagacttt ttttacactt tgattaatga ataccctgat 721 gttgtcaaac caattgggtt ggcagctaga gattctttga gattagaagc tggtatgtgt 781 ctttatggcc acgaattgac tgaagaaata actccaattg aagcatcttt gacttggtta 841 ataccaaaaa ctcgtcgtga tgaaaataat gatttcaatg gtgctagtaa aatattgctg 901 caaattaaag ataaatcttc ttttactcat agaagaattg gattgacctc caaaggtcca 961 tcaccaagag atggaaacaa gatatttaat gaagatggaa ctgttgagat tggatatgtg 1021 acatctggat caccatcacc tacattgggt ggaaatattg ctcaagctta tattgacaag 1081 aaacataaaa ttggcagtaa tgttaaaatt gaaattagaa ataaattaag agatgctgtt 1141 ataacaaaat tgccatttgt accaagcaat ttatataaac catag