Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_713990 741 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_713990 VERSION XM_713990.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 741) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 741) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 741) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 741) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 741) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 741) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..741 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>741 /locus_tag="CAALFM_C602490CA" /db_xref="GeneID:3639171" CDS 1..741 /locus_tag="CAALFM_C602490CA" /note="Protein of unknown function; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_719083.1" /db_xref="CGD:CAL0000188828" /db_xref="GeneID:3639171" /translation="MSSNQTSPVRRSILSPKPSNLTNNNSPLGKRFNTSSRLTPSPSK SGYHRSSATPSPKKQTLGFTIWEDKVDKSNSTTDVVGTPTSNKLNHNDQENILQPKKV ENKRFHNDRQPLSNLSINEFKGFISTNGAAPIQLTELYQPINFNNEFKSLHKQSNIPS YVTPSRRYRDKYLAKSGIDEIDEEIEDEMELLLSKKQQQRSTTLSAKPNNINKTHLIR KHTRSLTVGKNDSKLSLIRKNKFSILSN" ORIGIN 1 atgtcttcaa atcaaacatc accagttaga agatctatct tgtctcctaa accatctaac 61 cttaccaaca acaattcacc attaggtaaa agattcaata ctagttcaag attaacccca 121 tcgccatcta aatcaggtta ccatagatca tcagcaactc cttctcctaa aaagcaaacg 181 ttaggattca ctatatggga agataaagta gataaatcaa actctacgac cgatgttgtt 241 ggtactccta cttcaaataa attaaaccat aatgaccaag aaaacatatt acaacctaag 301 aaagttgaaa acaaaagatt ccacaatgat cgtcaaccat taagtaattt aagcattaat 361 gaattcaaag ggtttatttc aaccaatggc gcagcaccaa tacaattgac tgaattatat 421 caaccaatca actttaataa tgaattcaaa tctttacata aacaactgaa catcccaagc 481 tatgtgacac catcaagaag atacagagac aaatatttag ccaaatcggg tattgatgaa 541 attgatgaag aaatagaaga cgaaatggaa ttgcttttat ccaaaaaaca acaacaacgt 601 tctacaacat taagtgccaa acccaataac atcaataaaa ctcatttgat tagaaaacat 661 actagatcac taacggttgg taaaaatgac tctaaattaa gtttaattag aaaaaacaaa 721 ttctccattt tatcaaatta a