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LOCUS XM_713988 1908 bp mRNA linear PLN 18-APR-2022 (CAALFM_C602470WA), partial mRNA. ACCESSION XM_713988 VERSION XM_713988.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1908) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1908) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1908) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1908) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1908) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1908) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_713988.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1908 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1908 /locus_tag="CAALFM_C602470WA" /db_xref="GeneID:3639169" CDS 1..1908 /locus_tag="CAALFM_C602470WA" /note="Ortholog(s) have role in SRP-dependent cotranslational protein targeting to membrane, translocation and signal recognition particle, endoplasmic reticulum targeting localization" /codon_start=1 /transl_table=12 /product="signal recognition particle subunit" /protein_id="XP_719081.2" /db_xref="CGD:CAL0000185251" /db_xref="GeneID:3639169" /translation="MSTSIADAFKKLNVSPESSTSEHEKIFNVSYEYLSKVKKFNDLK ASKNCLVALINLDKYYKAEQIIRKLPSSLVNSLILEVAYVYYKIGKVQELVKLYEATN ENILPNAVDIGLKHVLAQSYYKIGSYEKALELYKELIKNNQYDDELDLVINEKAIVSQ LNFQKGGKIESSTTTNANNYDLLFNEALIKLSTLNTTQTLALLDKASQVVHAELSGED LVSELLPIKLTTAYVYQLTGESNKSLEILESIDVEKINDLLIKLIVKNNLYSHSTITN INLVDRDLNYQQNLHKLSQKLTVLQYERVLKNSLVLKFASGTLSKSQLNNQFINNFQQ TFPGDLLPLSYKVLSTLNIDHKDLQDLTKSKQIGRKLVKYIPTQTDNDLKIVATLILV SVNAQIGSFDQSLPILEQLTHESLATPKALPGLIGTLIAVYENTHNTKKLTDLLLKVL EKLLYTPKELLSGDINYYNFAKIVAFKALNQGHDKTATQLFEYLYEVNSNDQLIHSIL SNTNNDLLPLDELTSKKPIDEILSVDIDTLIPTTKNKPIKPIVKKVSKITKKKQNPKF GPNKVLKPIEDLQLDEERWLPMKLRSYYKPTKKEKKKASGGGGQQGATESSTRTTSSS NNKKKKKKGKK" misc_feature 55..480 /locus_tag="CAALFM_C602470WA" /note="Putative TPR-like repeat; Region: SRP_TPR_like; pfam17004" /db_xref="CDD:435703" misc_feature 142..216 /locus_tag="CAALFM_C602470WA" /note="PPR repeat [structural motif]; Region: PPR repeat" /db_xref="CDD:276811" misc_feature 223..309 /locus_tag="CAALFM_C602470WA" /note="PPR repeat [structural motif]; Region: PPR repeat" /db_xref="CDD:276811" misc_feature 325..423 /locus_tag="CAALFM_C602470WA" /note="PPR repeat [structural motif]; Region: PPR repeat" /db_xref="CDD:276811" ORIGIN 1 atgagtactt ctatcgccga tgcattcaag aaattgaatg tgtctccaga aagctcaact 61 tcagaacatg aaaaaatatt taatgtttct tatgaatatt tatcaaaagt gaaaaaattc 121 aatgatttaa aagcttcaaa aaattgtctt gtggcattga ttaatttgga taaatattat 181 aaagccgaac aaattattcg caaacttcct tcttcattag tcaatctgtt aattcttgaa 241 gtggcatatg tatattacaa gattgggaaa gttcaagaat tggttaaatt atacgaagct 301 accaatgaaa atattttacc aaatgctgtt gatattggtt tgaaacatgt attggcacag 361 tcttattata aaatcggtag ttatgaaaag gcattggaat tgtataaaga attaattaag 421 aacaaccaat atgatgatga attggattta gtcattaatg aaaaggcaat agtttcacaa 481 ttaaatttcc aaaaaggtgg gaaaattgaa tcaagtacga caactaatgc aaataattat 541 gatttgttat ttaatgaagc tttgattaag ttgtctactt tgaacacaac ccaaacatta 601 gcattgttag acaaagcttc tcaagtggta catgcagaat tatctggaga agatttggtg 661 tcagagttat tgccgatcaa attaaccaca gcatatgttt atcaattaac tggtgaatca 721 aataaaagtt tggaaatttt ggaaagtatt gatgttgaaa aaatcaatga tcttttaata 781 aaattgattg tgaaaaataa cctttattca cattctacaa tcactaatat caacttagta 841 gatagagact tgaattatca acaaaattta cataaattga gtcaaaaatt gaccgttttg 901 caatatgaaa gagttttgaa aaatagcttg gttttgaagt ttgctagtgg aactttgagc 961 aaatcacaat taaacaatca gtttattaat aattttcaac aaactttccc tggtgatctt 1021 cttccattat catataaagt gttgtcaaca cttaatatag atcacaaaga tttacaagat 1081 ttaacaaaac tgaaacagat aggcagaaaa cttgtcaaat acattccaac acagacagat 1141 aatgatttga aaattgttgc tacattaatt ttggtttctg tgaatgctca aattggatca 1201 tttgatcaga gtttacctat tttagaacaa ttgactcatg aatcattggc tacacccaag 1261 gcattaccag gattgattgg aactttgata gctgtttatg aaaacaccca taataccaaa 1321 aaattaactg atttattatt gaaagtttta gaaaaattat tatacactcc taaagaatta 1381 ttatctggag atattaatta ttacaatttt gccaaaattg ttgcattcaa agcattgaat 1441 caaggtcatg ataaaactgc cactcaattg tttgaatatt tgtatgaagt taattccaat 1501 gatcaattaa tccattcaat tttatctaat acaaataatg atttattacc ccttgatgaa 1561 ttaacaagta aaaaaccaat agatgaaata ttatcagttg atattgatac attaatacca 1621 acaacgaaaa ataaacctat aaaaccaatt gtaaaaaaag tttctaaaat aactaaaaag 1681 aaacaaaacc ccaaatttgg acctaataaa gttttgaagc ctatagaaga tttacaattg 1741 gatgaagaaa gatggttacc tatgaaatta agatcttatt ataaacctac taagaaagaa 1801 aagaagaaag ctagtggtgg tggcggtcaa caaggagcta ctgaatctag tactcgtaca 1861 acttcgctgt ctaataataa aaagaaaaag aagaaaggta agaaatag