Candida albicans SC5314 mRNA splicing protein (PRP45), partial

LOCUS       XM_713985                861 bp    mRNA    linear   PLN 18-APR-2022
            mRNA.
ACCESSION   XM_713985
VERSION     XM_713985.1
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 861)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 861)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 861)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 861)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 861)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 861)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..861
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>861
                     /gene="PRP45"
                     /locus_tag="CAALFM_C602440CA"
                     /db_xref="GeneID:3639166"
     CDS             1..861
                     /gene="PRP45"
                     /locus_tag="CAALFM_C602440CA"
                     /note="Protein required for pre-mRNA splicing; Spider
                     biofilm induced"
                     /codon_start=1
                     /transl_table=12
                     /product="mRNA splicing protein"
                     /protein_id="XP_719078.1"
                     /db_xref="CGD:CAL0000177849"
                     /db_xref="GeneID:3639166"
                     /translation="MASCNLLVIQTTSIIMFSSLLSRPVNSSYDPSYHFSPVTREIKN
                     DPTSNGVVSTTKNATPLAPSKYDTTIPLKKRYPNLVHNFPKPELDENVILETKKIIDS
                     ILNPSDEPTNDINYIKYENPNPNPNPNPNPNQEQQQQSSSSSSKIIQIKQFQEDPMLP
                     PKFKLRKNRHERIIEDVTFVKDLKTKKLTKEDREFWNIPAAVSNWKNSQGFTIGLDKR
                     MIGREHVPIEMNIEKFNDLSTALSDADLQAREDLKQRNEIRQQKQLQEKRLRDEKIKE
                     IANRSKRRRY"
     misc_feature    436..852
                     /gene="PRP45"
                     /locus_tag="CAALFM_C602440CA"
                     /note="SKIP/SNW domain; Region: SKIP_SNW; pfam02731"
                     /db_xref="CDD:460666"
ORIGIN      
        1 atggcatctt gtaatcttct agtcatacaa accacatcca taattatgtt tagttcacta
       61 ctatcaaggc cagtcaatag ttcctacgat ccgtcttatc atttttctcc tgttactaga
      121 gagattaaaa atgaccccac atcaaatgga gttgtctcaa ccacaaagaa tgcaacacct
      181 cttgccccat caaaatatga tacaactatc cctttaaaaa aacgatatcc taatctagta
      241 cataatttcc ccaaaccaga attagatgag aatgtaatac tagagactaa aaaaatcatt
      301 gattccatat tgaatccctc tgatgagcca actaatgata ttaattatat caaatatgaa
      361 aatccaaatc caaatccaaa tccaaatcca aatccaaatc aagaacaaca acaacaactg
      421 ctgctgctgc tgctgaaaat aattcaaatc aaacaatttc aagaagatcc aatgcttcca
      481 ccaaaattca aattacgtaa gaatcgacat gaaaggatca ttgaagatgt tacatttgtt
      541 aaagatctca aaacgaaaaa attaactaaa gaagatcgag aattttggaa tataccagca
      601 gcagtatcaa attggaaaaa ttctcaaggt tttactattg gattagataa aagaatgatt
      661 gggagagaac atgtacctat agaaatgaat attgaaaaat ttaatgattt atcaacagca
      721 ttatctgatg ctgatttaca agctagagaa gatcttaaac aacggaatga aattcgtcaa
      781 cagaaacaat tacaagaaaa aagattacgt gatgaaaaaa ttaaagaaat tgctaatcgt
      841 tctaaaagaa gacgatatta a