Candida albicans SC5314 Pbp2p (PBP2), partial mRNA.

LOCUS       XM_713013               1590 bp    mRNA    linear   PLN 18-APR-2022
ACCESSION   XM_713013
VERSION     XM_713013.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 1590)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 1590)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 1590)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 1590)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            On Dec 8, 2016 this sequence version replaced XM_713013.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>1590
                     /gene="PBP2"
                     /locus_tag="CAALFM_C603940CA"
                     /db_xref="GeneID:3640267"
     CDS             1..1590
                     /gene="PBP2"
                     /locus_tag="CAALFM_C603940CA"
                     /note="Putative RNA binding protein; transcript regulated
                     by Nrg1, Mig1, and Tup1"
                     /codon_start=1
                     /transl_table=12
                     /product="Pbp2p"
                     /protein_id="XP_718106.1"
                     /db_xref="CGD:CAL0000187269"
                     /db_xref="GeneID:3640267"
                     /translation="MSDDGNDTNNIHVDTPDEPVLTPPIETVNHNITSTLKRKNEDAD
                     DNEGNEQSANSHSGNDTINSSSIKRIALDSEQLDLQDKEEELQQTAPIITNNSTSHLE
                     TESEELDKQNEDANKTQETLEPAYAPSESDHADDQNTGSSSSSKPVSNHRDRDDPTFI
                     QLRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKGPAENVAR
                     AFGLITRVILEEPEDEPASINSQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAKL
                     KAAENALPYSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHKVVLYNPANYQPT
                     DQSLGGRQRQPPSNSYNNPMGYQAKLPPFSKPPQHQQSPYNFSMMFQPAVQPQHFGSP
                     VTSNPNAVSPVGMQPSVNIPPQNQFTDEFGNTIVGEVITTPPIQAGQDKYNQDVFVAN
                     SSIGSVIGKRGNNIKHIRETSACTYVKIEPDKGQSMMLGGGKGMTNIRKLTLTGTLNS
                     IQTAIYLINQRINADRERNTR"
     misc_feature    478..687
                     /gene="PBP2"
                     /locus_tag="CAALFM_C603940CA"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
     misc_feature    733..936
                     /gene="PBP2"
                     /locus_tag="CAALFM_C603940CA"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
     misc_feature    1330..1557
                     /gene="PBP2"
                     /locus_tag="CAALFM_C603940CA"
                     /note="K homology (KH) RNA-binding domain, type I; Region:
                     KH-I; cl00098"
                     /db_xref="CDD:469614"
ORIGIN      
        1 atgtcagacg acggaaacga tacaaataac attcatgtgg atactccaga tgaaccagtt
       61 ttaacacctc caattgagac tgtaaatcat aacattactt caactttaaa gcggaaaaat
      121 gaagatgcag atgataatga aggcaatgaa caatcggcaa acagtcattc gggcaatgat
      181 accatcaatt catcatcgat caaaagaatc gcattagata gcgaacaatt agatttacag
      241 gataaagagg aagaactaca acagacagcc cccattatta ccaacaacag tacaagtcat
      301 ttagagaccg aatctgaaga gttggataaa cagaatgaag acgccaacaa gacacaagaa
      361 actcttgaac cagcgtacgc accatcagag ctggatcatg cagacgacca aaacaccggt
      421 tcatcttcct catctaagcc agtatcaaac catcgtgata gagatgatcc cacatttatt
      481 cagttgagaa tgtattgtcc agtcaaagaa gctagtacga ttgttgggag aaaaggagaa
      541 acaatcaatc atctaagaga aaaggcaaat gtaagaatta ctgttagtga gaatttaaaa
      601 ggagttcctg aaagaattgt tgctgtgaaa ggtccagcag agaatgttgc tagagctttt
      661 ggattaatca ccagagttat tttggaagaa ccagaggacg aacctgcaag cattaattca
      721 caacaatata atttaaagct attaatacca catcctatga ttgggttcat tattgggaaa
      781 cagggattga aattcagaga aattgaagaa aactcagcag ccaagttaaa agcagcagaa
      841 aatgctttac catattctac tgatcgtgtt ttatctgtta tgggtgttgg agatgctatt
      901 cacattgctg tttattatat tgcccaagtt atgcttgaac acaaggaggt attgaagaag
      961 cataaagttg tgttgtacaa ccctgctaac tatcaaccaa cagatcaaag tcttggaggc
     1021 agacaacgtc aaccgcctag taattcatac aacaatccta tgggttatca agctaaattg
     1081 ccgccattta gtaagccacc acaacaccaa cagagtcctt acaatttctc aatgatgttt
     1141 caaccagcag ttcaacctca acattttggt tcgccagtaa catcaaaccc aaatgctgtc
     1201 tcacctgttg gtatgcaacc ttctgtcaat atacctccac agaaccagtt cactgatgag
     1261 tttggaaata cgatagttgg tgaagttata acaactccac ctattcaagc aggtcaagat
     1321 aaatataatc aagatgtctt tgttgccaac tctagtattg ggtctgttat tgggaaacga
     1381 ggtaacaaca tcaaacacat cagagaaact agtgcatgta catatgttaa aattgaacca
     1441 gataagggac aatcgatgat gttaggtgga ggcaaaggta tgactaatat cagaaagtta
     1501 actctaacag gaaccttgaa ttctattcaa actgccattt atttgatcaa ccagcgaatc
     1561 aatgctgata gagagagaaa tacccgttaa