Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_713012 2157 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_713012 VERSION XM_713012.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2157) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2157) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2157) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2157) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2157) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2157) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_713012.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2157 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2157 /gene="OPT8" /locus_tag="CAALFM_C603930WA" /db_xref="GeneID:3640266" CDS 1..2157 /gene="OPT8" /locus_tag="CAALFM_C603930WA" /note="Oligopeptide transporter; similar to Opt1 and to S. cerevisiae Ygl114wp, but not other OPTs; induced by nitric oxide, amphotericin B; expression of OPT6, 7, 8 does not complement mutants lacking Opt1, Opt2, and Opt3; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="Opt8p" /protein_id="XP_718105.1" /db_xref="CGD:CAL0000175124" /db_xref="GeneID:3640266" /translation="MTIETISNNEGIRQRSASESTHTHTYLDQLDIPQITLRSTIVGL LIGSLVLISNFQFGLQTGWVSMMSLPAALLAFSIFKLLPISIAKNFTDVENVFVQSIA VAVGTGPLCYGFIGIIPAMEKFMTSEESGLGRPLTFGLGQLMIWSLGLGLFGVFFAIP LRKQVIVKEKLPFPSGSATATLISVLHGSDIYQDKEEISEKLDIEEEEGRETGSIATE SESLTQQSSKSQLITTTNIQDDYDSNMRSLIITFIISATYTILSFFLPILKKIPIFGN HLSVNYLWNFQPSPAYIGQGIIMGLPTVSYMLFGAILGWGILAPLAKHMEWAPGRIDD WINGGQGWILWISLTVMISDSLVSFVVVSIKSINNALDNFRQRRDLDQFLELQQSQQS EYLLQDQEETRSSTSSNENPENSTYDGKRTQEDCKYTMEVPERHLVSTKTTVIGIAVS TLLCIISLKLVFGNIVPIYASLAAIILAMFFSILGVRALGETDLNPVSGIGKLSQLIF ALIIPSNHPAKILINLVAGGVAEAGAQQAGDLMQDLKTGHLIGASPKAQFIAQILGTL YSVGLSSIMYKVYNSVYKIPSDMFRIPTAVVWIDCSRLVTGQGLPPHIREFALVLGVI FGIISLLKNTVPPTSSYHKYLVYLPSGVAVGVGIYNTPNFTLARFIGGLICYNWQNIG PNGKIGMIIFSSGLVLGEGLFSGFTMLLTSLGVKHW" misc_feature 82..2112 /gene="OPT8" /locus_tag="CAALFM_C603930WA" /note="oligopeptide transporter, OPT superfamily; Region: OPT_sfam; TIGR00728" /db_xref="CDD:273236" ORIGIN 1 atgacaatag agacgatatc aaataatgaa ggaatacggc agagatcagc cagtgaaagc 61 actcacacac atacttatct agatcaatta gacatcccgc aaataacgtt gaggtctact 121 atagtcggat tactaatagg ttcattggtc cttatatcga attttcaatt tggtttacaa 181 accggatggg tttcaatgat gtcgttacca gctgccttat tagcattttc tattttcaag 241 ttattaccaa tatccattgc taagaatttc accgatgttg aaaatgtatt tgtccagagt 301 atagctgttg cagtaggaac aggaccccta tgttatggat tcattggcat aatccctgca 361 atggaaaagt ttatgactag tgaagaaagt ggtttgggtc gacctttgac ttttgggttg 421 ggccagttaa tgatttggtc attgggtctc ggattattcg gggtattttt tgccataccg 481 ttgcggaaac aagttattgt aaaggaaaaa ttacctttcc catctggcag tgcaaccgca 541 actttaattt cagtgttgca tggaagtgac atttatcaag ataaagagga gatcagtgaa 601 aagttggata tcgaagaaga agaagggaga gaaacaggta gtattgcaac tgaactggag 661 agtttaaccc aacaatcgtc aaaatcccaa ctcataacta ctaccaatat tcaagatgat 721 tatgattcaa atatgagatc attaataatc acatttataa tatcagccac atacaccata 781 ctttcattct tcctccctat tttgaaaaag attcctattt ttggcaatca tttatcggtc 841 aattatttat ggaacttcca accatctccg gcatatatag gtcaaggtat cattatgggg 901 ttgccaacag tttcctatat gttgtttggt gctatcttgg gttggggtat attagctcca 961 ttggcaaagc atatggagtg ggcacctgga agaattgacg attggataaa tgggggacaa 1021 ggttggatct tatggattag cttaacggta atgataagtg actccttggt gtcgtttgtt 1081 gtggtgagca tcaaatcaat taataatgca ttagataatt tcagacaaag aagagatcta 1141 gatcaatttc tagaattgca acaaagtcaa caaagtgaat acttattaca agatcaagag 1201 gaaactcgat cactgacttc atccaacgaa aatcctgaaa atagtactta cgatgggaag 1261 agaactcaag aggattgcaa atatacaatg gaagtaccag aaagacattt agtttcaact 1321 aaaacaacgg tgatcggaat tgctgtatcc acattgcttt gcattatttc tttgaaacta 1381 gtgtttggga acatagttcc tatatatgca tcattagcag caattatatt ggcaatgttt 1441 ttctccatat tgggagtcag agcattaggt gagactgatt taaacccagt gagtggaatt 1501 ggaaaattat cacaattgat ttttgcatta ataataccaa gcaaccatcc agccaagatt 1561 ttgattaatt tggtcgctgg tggagtagct gaagcagggg ctcaacaagc aggtgatctt 1621 atgcaagatt tgaaaaccgg acatttaatt ggagcatcgc caaaagccca atttattgct 1681 cagatattgg ggactcttta ttctgttgga ttaagctcaa tcatgtataa agtgtacaac 1741 agtgtgtaca agataccaag cgatatgttt agaattccaa ctgcagtggt ttggattgat 1801 tgttcaaggc tagtgactgg tcaaggatta cctcctcata ttcgtgaatt tgcgttggtt 1861 ttaggagtca tttttggtat tatatcgtta ttaaagaata ctgtgccgcc cacttcactg 1921 tatcataaat atttggttta cttgccaagt ggagtagccg ttggtgtagg tatttacaac 1981 accccaaatt tcactttggc caggtttatt ggtgggttga tttgttacaa ttggcagaat 2041 ataggtccta atggtaagat tggtatgatt atattcagta gtggattggt gttgggcgag 2101 ggacttttta gtggattcac tatgctttta actagtttgg gtgttaagca ttggtaa