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LOCUS XM_713009 852 bp mRNA linear PLN 18-APR-2022 (CAALFM_C603910CA), partial mRNA. ACCESSION XM_713009 VERSION XM_713009.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 852) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 852) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 852) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 852) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 852) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 852) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_713009.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..852 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>852 /locus_tag="CAALFM_C603910CA" /db_xref="GeneID:3640263" CDS 1..852 /locus_tag="CAALFM_C603910CA" /note="Ortholog(s) have U2 snRNA binding activity, role in mRNA splicing, via spliceosome and U2 snRNP, U2-type spliceosomal complex localization" /codon_start=1 /transl_table=12 /product="U2 snRNP complex subunit" /protein_id="XP_718102.2" /db_xref="CGD:CAL0000190879" /db_xref="GeneID:3640263" /translation="MSKDFPAKPPHPSTLESIDLSKLDPQLVLDKASQRWLFEEGDQE YEYDYIKEQWVNTSKRSLSEDDTNKEDIKRQRKQDMSKLKEELNSLKQKKKNSSIFIS NLPVDSGFSEIEEAFSKYGKISVGKDEKPRIKMYTNEKGSFKGEALIIYSNPESALLA IEMMDNTQYNGNTIRVEEAKFDNKKENPKKKQDSLSKAVIIRNMVRKEELANDIHIKQ DIIDDIKEECKNIGISDIEDIVFNEENATVLVKFSKEESLLLCIKKFHNRYYDGLTLD VQESKVI" misc_feature 286..555 /locus_tag="CAALFM_C603910CA" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" misc_feature 586..825 /locus_tag="CAALFM_C603910CA" /note="RNA recognition motif (RRM) superfamily; Region: RRM_SF; cl17169" /db_xref="CDD:473069" ORIGIN 1 atgagtaaag attttcctgc taagccacca catccttcta cacttgagag cattgattta 61 tcaaagttag atccacagtt agttttggat aaggcatcgc agagatggtt attcgaggaa 121 ggagaccaag aatatgaata tgattacata aaggagcaat gggtaaacac ttctaaaaga 181 tcactatcag aagatgatac gaacaaagaa gatatcaagc gacaacggaa acaagatatg 241 agtaaattga aggaagaatt gaatagtttg aaacagaaga aaaagaacag cagtatattt 301 atatcaaatt taccagtcga ttctgggttt tcggaaatcg aggaagcatt ttcaaagtat 361 ggtaaaatat ctgttggaaa agatgaaaaa cctcgaataa agatgtacac taatgagaaa 421 ggttctttta aaggcgaagc tttgattata tattcgaatc cagaaagtgc attattggct 481 attgaaatga tggataatac ccaatataat ggcaacacca tacgagttga agaagctaag 541 tttgataaca aaaaggagaa tccaaagaaa aaacaagata gcctttctaa agctgtgatt 601 attcgaaata tggttagaaa agaagagctt gccaatgata tacacatcaa gcaagacata 661 attgatgaca tcaaggaaga atgtaaaaat ataggcatat ctgatatcga agatatagtg 721 tttaatgagg aaaatgcaac ggttctagta aagttttcca aagaagagct gttgttgtta 781 tgcatcaaga agtttcataa tcgatattac gacggtttga cattggatgt ccaagaatca 841 aaagtcatat ga