Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

Candida albicans SC5314 Pga61p (PGA61), partial mRNA.


LOCUS       XM_713004                672 bp    mRNA    linear   PLN 18-APR-2022
ACCESSION   XM_713004
VERSION     XM_713004.2
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 672)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 672)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 672)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 672)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 672)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            On Dec 8, 2016 this sequence version replaced XM_713004.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>672
                     /gene="PGA61"
                     /locus_tag="CAALFM_C603860CA"
                     /db_xref="GeneID:3640292"
     CDS             1..672
                     /gene="PGA61"
                     /locus_tag="CAALFM_C603860CA"
                     /note="Putative GPI-anchored protein"
                     /codon_start=1
                     /transl_table=12
                     /product="Pga61p"
                     /protein_id="XP_718097.2"
                     /db_xref="CGD:CAL0000195894"
                     /db_xref="GeneID:3640292"
                     /translation="MKSGLLLAVILPVAFAVKKDQQSCNSSCVKVLQKQQESCPSGSD
                     ADCLCKLSDSDYWEPLTDCDCINPDKKLSASEIKVQICGAPSSSSTPTSSTETTSSTE
                     AETTEAETTEQPSSSTSSNTESSKTTILETPSIQELNAESTTSVITPLTESAVAAVAN
                     TDTSTLIEPQNTEATPEVAPLIQPQLNNGSDLAQVSVQAFENGAGRAAVIGSGSLLAL
                     LLNFI"
ORIGIN      
        1 atgaaatctg gtttactact tgctgtgatt ttaccagttg cttttgctgt gaaaaaagac
       61 caacaaagtt gtaactccag ttgtgtcaag gtcttacaaa aacaacaaga atcatgtcct
      121 tcaggttcag atgccgattg cttatgtaaa ttatctgact cagattactg ggaaccattg
      181 actgactgtg attgtattaa cccagataaa aaactttcag catcagaaat taaggttcaa
      241 atatgtgggg ctccatcatc atcgtcaaca ccaacctcat caacagaaac aacttcatca
      301 acagaagcag aaactaccga agcagaaacc actgaacaac caagcagcag taccagcagt
      361 aataccgagt catctaaaac tactattctt gaaaccccct ctatacaaga gctcaatgct
      421 gaatcaacta ctagtgttat taccccctta acagaatcag ctgtggctgc cgtagcaaat
      481 actgacacca gtactttaat tgaaccacaa aacacagaag ctacaccaga agttgctcca
      541 ttaattcaac ctcaactaaa taatgggtct gatttggccc aagtatctgt tcaagcattt
      601 gaaaatggtg ctggaagagc tgctgttatt ggatctggtt cattacttgc attgttattg
      661 aactttattt aa