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LOCUS XM_713002 4488 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_713002 VERSION XM_713002.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 4488) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 4488) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 4488) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 4488) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 4488) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 4488) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_713002.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..4488 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>4488 /gene="SNQ2" /locus_tag="CAALFM_C603840CA" /db_xref="GeneID:3640290" CDS 1..4488 /gene="SNQ2" /locus_tag="CAALFM_C603840CA" /note="Protein similar to S. cerevisiae Snq2p transporter; member of PDR subfamily of ABC family; transposon mutation affects filamentation; benomyl-induced transcription; detected at yeast-form cell plasma membrane by mass spec" /codon_start=1 /transl_table=12 /product="ATP-binding cassette transporter" /protein_id="XP_718095.2" /db_xref="CGD:CAL0000187456" /db_xref="GeneID:3640290" /translation="MSSEDIGSSSSSLQEYVGQQQHNKIQPSTDDDYNEDDYESRRLH LVRTVSSINHHNFDEKFDTISREISRQVTNKEGEFQLRLDEFNLAKILANFVYFAKKQ GIVLRKSGITFQDLCVYGVDESFAIAPTVTDLLKGPVGAVQAILSQMKTPPRKILKNL NGFAKPGESVLVLGRPGAGCTTFLKALSGTDFDLYKGVTGDIRYDGLPQKEMLKLFKN DLVYNPELDVHFPHLTVDQTLTFAIACKTPEMRINGVTRDEFINAKKEILATVFGLRH TYHTKVGNDFVRGVSGGERKRVSIAEALACNGSIYCWDNATRGLDASTALEFAQAIRT STKLLKTTAFVTIYQAGEGIYETFDRVTVLYDGHQVYYGPANKAKKYFEDMGWECPPR QSTAEFLTAITDPIGRFPRAGWENKVPRTAQDFEHYWLNSPQYQELMQEIKDYNDEID EDETRSKYYQSIQQEKMKGSRTKSPFTISYLEQLKLCFIRSYQRILGDSAYTITLMFA SVAQAFVAGSLYYNTPDDVSGAFSRGGVIFFAVLFMSLMGLAEISASFSSRPILMKQK NYTMYHPSADSLSNFVMSIPISIFINTFFVIILYFLSNLARDAGKFFICYLFVIMLHL TMKSMFQAIAAINKSIAGANAMGGILMLASLMYSSYMIQRPSMHPWFKWISYINPVLY AFEAVIASEFHGRKMQCTSQYLTPSGPGYENLGAGEQVCTFIGSVPGQSWVLGDDYLR IAYTYRFSHVWRNLGILFGFLAFFLAIATLGTEYVKPITGGGDKLLFLKGKVPEHITL PSEKKEEDIESGGNSDTTATSNGTLSQGKSEEKAAIVDDGLKAKGVFVWKDVDYVIPY EGKKRQLLQNVSGYCVPGTLTALMGESGAGKTTLLNVLAQRVDFGVITGDMLVNGRPL DTSFSRRTGYVQQQDIHFSEVTVRESLQFAARLRRSNDVSDAEKLEYVEKIIDVLDMR GYADAVVGRLGNGLNVEQRKKLSIGVELVAKPSLLLFLDEPTSGLDSQSAWAIVKLLR DLANAGQSILCTIHQPSATLFEEFDRLLLLKKGGIVTYFGDIGPRSRTILDYFERNGA RHCDDKENPAEYILEAIGAGATASTDFDWGEIWAQSPEKVQTDAKRDELINESAKNAT DTSATDSPSEKNLTSKYATPYWYQFRHVTHRTSLIFYRDPDYIAAKVFLMTIAGLFIG FTFFGLKHTKTGAQNGMFCAFLSCVIAAPLINQMLEKAGSRDIYEVREKLSNTYHWSL LILPQIIFEVIYMIIGGTIMFVCLYFPTQVSTVASHSGMFYFSQAIFLQTFAVSFGLM VSYVSPDIESASVIVSFLYTFIVSFSGVVQPVNLMPGFWTFMNKVSPYTYFIQNLVSS FLHDRTIRCNAKELSYFNPPSGQTCKEFASAFISRNGGYLVDEGATSNCGYCNFSNAD QYLLTIGAKFSYRWRNIGFFCVYIIFNISVCLVLYYFLRYRKVSFNVTGLVNKFKKSK K" misc_feature 250..4434 /gene="SNQ2" /locus_tag="CAALFM_C603840CA" /note="Pleiotropic Drug Resistance (PDR) Family protein; Region: 3a01205; TIGR00956" /db_xref="CDD:273362" ORIGIN 1 atgtcatcag aagatattgg aagttcaagt tcatctcttc aagagtatgt tggtcaacag 61 caacacaaca aaatacaacc ttccaccgat gatgattaca atgaagatga ttatgaaagt 121 agaagattac atttagtaag aacagtttca tcaatcaatc atcataattt tgatgaaaaa 181 ttcgatacta tatcgagaga aatttcccgt caagtgacta ataaagaagg agaatttcaa 241 ttaagattag atgaattcaa tttagctaaa atattagcca attttgttta ttttgctaaa 301 aaacaaggaa ttgttttacg gaaaagtgga attacattcc aagatctttg tgtttatgga 361 gttgatgaat catttgctat tgctcctacc gttactgatt tattaaaggg accagttggt 421 gctgttcaag ccatattatc acaaatgaaa acaccaccac ggaaaatttt gaaaaattta 481 aatgggtttg ctaaacccgg tgaatcagtg ttggttttag gtagaccagg tgctgggtgt 541 acaactttct tgaaagcatt aagtggaact gattttgatt tatacaaggg agtcacgggt 601 gatatcagat acgatggatt accacaaaag gaaatgttga aattgtttaa gaatgatttg 661 gtgtataatc ctgaattaga tgttcatttc ccccatttaa cagtggatca aactttgaca 721 tttgctattg cttgtaaaac cccagaaatg agaatcaatg gagtcactag agatgaattc 781 atcaatgcta aaaaagaaat attggcaact gtgtttgggt taagacacac ttatcatacc 841 aaagtgggta acgattttgt tcgtggtgtt tccggtgggg aaaggaaaag agtatctatt 901 gctgaagcat tagcatgtaa tggatcgatt tattgttggg ataatgctac tagagggtta 961 gatgcatcta ctgctttaga atttgctcaa gccattagaa cttcaactaa attattgaaa 1021 acaacggcat ttgtcaccat ttatcaagct ggtgaaggta tttatgaaac attcgatcgt 1081 gtcactgtgc tttacgatgg acatcaagtt tattatggtc cagcaaacaa ggccaagaaa 1141 tatttcgaag atatgggttg ggaatgtcca ccaagacaat cgacagcaga attcttaaca 1201 gctattactg atccaattgg tagattccct agagctggtt gggaaaataa agttcctaga 1261 acagcacaag attttgaaca ttattggttg aattcaccac aatatcaaga attaatgcaa 1321 gaaatcaaag attataatga cgaaattgat gaagatgaaa ctagaagcaa atattatcaa 1381 tcaattcaac aagaaaaaat gaaaggttct agaaccaaat ctcctttcac gattagttat 1441 ttagaacaat tgaaattatg tttcattaga agttatcaaa gaatcttggg tgatagtgct 1501 tacacaataa cccttatgtt tgcctcagtt gctcaagctt ttgttgcagg gtctttatat 1561 tataatactc ctgatgatgt ttctggggca ttttctcgag gtggggtcat tttctttgct 1621 gttttgttca tgtcattaat gggtttagca gaaatttctg cttcatttag tagtcgacca 1681 attttgatga aacaaaaaaa ttatacaatg tatcacccat cagcagattc cctttccaat 1741 tttgtcatgt cgattccaat tagtattttc atcaatactt ttttcgtcat tatcttgtac 1801 tttttatcca atttagctcg tgatgctggc aagtttttca tttgttattt gtttgttatt 1861 atgctacatt tgacaatgaa atcaatgttt caagcaattg ctgccatcaa caaaagtatt 1921 gccggtgcaa atgccatggg tgggattttg atgttggcat cattaatgta ttcctcatat 1981 atgattcaac gtccttcaat gcatccatgg ttcaaatgga tctcctatat caaccctgtg 2041 ttatatgcct ttgaagccgt tattgcttct gaattccatg gtcggaaaat gcaatgtact 2101 tctcagtacc ttaccccatc aggacccggg tatgagaact taggtgctgg tgaacaagtg 2161 tgtacattta ttggatcagt tccaggacaa agttgggttt taggtgatga ttatttaaga 2221 attgcttata cttatcgatt cagccatgtt tggagaaatt taggaatttt gtttgggttt 2281 ttagcatttt tcctagctat tgctactctt ggtaccgaat atgtcaaacc aattactggt 2341 ggtggtgata aattattgtt tttgaaagga aaagtccctg aacatattac attacccctg 2401 gaaaagaaag aagaagatat cgaatctggt ggtaatagtg atacaactgc cacttccaat 2461 ggcacccttt cacaaggcaa gctggaagaa aaggcagcta ttgtcgatga tggattgaaa 2521 gctaaaggtg tatttgtttg gaaagatgtc gactatgtaa tcccttatga aggtaaaaag 2581 cgtcaattgt tacaaaatgt tagtggatat tgtgttcctg gtacattgac agcattaatg 2641 ggtgaatccg gtgctggtaa aacaaccttg ttaaatgttt tggcccaacg tgttgatttt 2701 ggggtcataa ctggtgatat gttagtcaat ggtcgtccct tggatacttc atttagtcgt 2761 cgtactggat atgttcaaca acaagatatt catttttctg aagtcacagt gagagaatca 2821 ttacaatttg ctgcaagatt aagaagatct aatgatgtta gtgatgctga aaaattagag 2881 tatgtggaga aaatcattga cgttttggac atgcgtggat atgctgatgc cgttgttgga 2941 agattaggta atgggttaaa tgttgaacaa cggaaaaaat tgtcgatcgg ggttgaattg 3001 gttgctaaac cttcattatt acttttcctt gatgaaccaa catctggttt agattcacaa 3061 tctgcttggg ccattgttaa attattgaga gatttagcta atgctggaca atcgatttta 3121 tgtactattc atcagccttc agccacttta tttgaagagt ttgatcgatt attattattg 3181 aagaaaggtg ggattgttac ttattttgga gatattggac caagatcacg taccatatta 3241 gattattttg aaagaaatgg agctcgtcat tgtgatgata aggaaaatcc ggcagaatat 3301 attttagaag ctattggtgc tggtgcaacc gcatctactg attttgattg gggtgaaatt 3361 tgggcacaat cgccagaaaa agtacaaact gatgccaaac gtgatgaatt aatcaatgaa 3421 tcagctaaaa atgctacaga tacttctgct actgattcac cttcagaaaa gaacttgact 3481 agtaaatatg ctactccata ttggtaccaa ttccgtcatg tgactcatag aacatcattg 3541 atcttttatc gtgatccaga ttatattgcc gccaaagttt tcttaatgac aattgctgga 3601 ttatttattg ggtttacatt ctttggattg aaacatacta aaactggtgc tcaaaatggt 3661 atgttttgtg ccttcttatc atgtgttatt gctgctccac ttattaatca aatgttagaa 3721 aaagctggac tgagagatat ttatgaagtt cgagaaaaat tatcaaatac ttatcattgg 3781 tcacttttaa tattaccgca aatcatattt gaagtgattt atatgatcat tggtgggaca 3841 attatgtttg tttgtcttta tttccctact caagtgagta ctgtggccct gcattccggg 3901 atgttttatt tcagtcaagc tattttcctt caaacatttg ctgtttcatt tggattaatg 3961 gtactgtatg tttcccctga tattgaaagt gcttcagtga ttgtttcatt cttgtataca 4021 tttattgtat cattttccgg tgttgttcaa ccagttaatc ttatgccggg attttggaca 4081 tttatgaata aagtatcacc ctatacttat ttcattcaaa atcttgtttc atcatttttg 4141 catgatagaa ccattcgatg caatgctaaa gaattgtcat attttaatcc accatcagga 4201 caaacttgta aagaatttgc tagtgcattc atcagtcgta atggtggtta tttagttgat 4261 gaaggagcaa cttcaaattg tgggtattgt aattttagca atgccgatca atatttattg 4321 accattggag caaaattttc ttatagatgg agaaatattg gatttttctg tgtttacatt 4381 attttcaata ttagtgtttg cttagtgctt tattactttt tgagatatag aaaagtatct 4441 ttcaatgtta ctggattagt taacaaattt aaaaaatcca aaaagtaa