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LOCUS XM_712996 1641 bp mRNA linear PLN 18-APR-2022 symporter (HGT10), partial mRNA. ACCESSION XM_712996 VERSION XM_712996.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1641) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1641) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1641) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1641) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1641) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1641) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712996.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1641 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1641 /gene="HGT10" /locus_tag="CAALFM_C603790CA" /db_xref="GeneID:3640309" CDS 1..1641 /gene="HGT10" /locus_tag="CAALFM_C603790CA" /note="Glycerol permease involved in glycerol uptake; member of the major facilitator superfamily; induced by osmotic stress, at low glucose in rich media, during cell wall regeneration; 12 membrane spans; Hap43p-induced gene" /codon_start=1 /transl_table=12 /product="glucose-inactivated glycerol proton symporter" /protein_id="XP_718089.1" /db_xref="CGD:CAL0000200530" /db_xref="GeneID:3640309" /translation="MGGFIDNIFKRTTTAGLTGRKLRAAVTITATLGFSLFGYDQGLM AGLISAEQFNWEFPATKDNSVIQGAVTASYELGCFFGAIFALLRGDALGRKPIIFFGA TIIILGTIISVTPFRPHWPLGQFVVGRVITGIGNGMNTATIPVWQSEMSKPENRGKLV NLEGAVVAFGTFIAYWLDFGLSYVDSSVSWRFPVAFQIFFALWVIFGIIQLPESPRWL ISKDRKPEAFEVLAALNDTTPDDDAIVAEASVIIDAVRRNAKVQAGFKDLFTGGKTAH FQRMLIGSSTQFFQQFTGCNAAIYYSTLLFYETVFHHTKYRLSMILGGVFATIYALAT LPSFFLIDTLGRRNLFLIGAIGQGISFLISFACLINPTEQNAKGAAVGIYLFIVFFAF TILPLPWIYPPEINPLRTRTTASAVSTCTNWLTNFAVVMFTPPFISASGWGCYLYFAV MNFLFVPIIFFFYPETAGRSLEEIDIIFAKAYVEKRQPWRVAATLPKLSLQEVEDESK SLGLYDDDFEKDNFETKEDVSDGTASNSNGVFEKPENV" misc_feature 76..1434 /gene="HGT10" /locus_tag="CAALFM_C603790CA" /note="Sugar (and other) transporter; Region: Sugar_tr; pfam00083" /db_xref="CDD:395036" misc_feature order(109..114,121..126,133..135,244..246,406..411, 415..423,430..432,490..492,499..504,511..513,859..861, 868..873,880..888,895..897,988..990,1000..1002,1168..1173, 1183..1185,1195..1197,1243..1245,1252..1257,1264..1269, 1276..1278) /gene="HGT10" /locus_tag="CAALFM_C603790CA" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340914" ORIGIN 1 atgggtgggt tcatagataa tattttcaaa agaaccacaa ctgctggatt aaccggtaga 61 aaattacgtg cagcagtcac tattactgcc acacttgggt tttcactttt cggatatgat 121 caaggtttaa tggccggatt aatttctgct gaacaattca attgggaatt ccctgctact 181 aaagataata gtgttatcca aggtgctgtt actgcatctt atgaattggg atgtttcttt 241 ggtgctattt ttgctttact tagaggtgat gctttaggta gaaaaccaat tattttcttt 301 ggtgctacta ttattattct tggtacaatt atttccgtta ctccatttag accacattgg 361 ccattaggtc aatttgtggt tggtagagtc atcactggta ttggtaatgg tatgaatact 421 gctaccattc cagtgtggca atcagaaatg tcaaaaccag aaaatagagg taaattggtc 481 aatttagaag gtgccgttgt ggcatttggt acttttattg cttattggtt agattttggg 541 ttatcttatg ttgattcttc agtttcttgg agattcccag ttgctttcca aattttcttt 601 gccttatggg ttatttttgg aattattcaa ttgcctgaat ctcctcgttg gttgatttct 661 aaagatagaa aaccagaagc ttttgaagtt ttagctgctt taaatgatac tactccagat 721 gatgatgcta ttgttgctga agctagtgtt attattgacg ccgttagaag aaacgctaaa 781 gtccaagctg gtttcaaaga tttgtttact ggtggtaaaa ctgctcattt ccaaagaatg 841 cttattgggt catcaaccca atttttccaa caattcactg gttgtaatgc tgctatttat 901 tattccactt tgttgttcta cgaaaccgtt ttccatcata ctaaataccg tttatcaatg 961 attttgggtg gggtgtttgc tactatttat gctttagcca ctcttccatc attcttttta 1021 attgatactt tgggtagaag aaatttgttt ttaattggtg caattggtca agggatttca 1081 ttccttattt catttgcttg tttgattaac ccaactgaac aaaatgctaa aggtgctgcc 1141 gttggtattt atttgtttat tgttttcttt gccttcacca ttttaccatt accatggatt 1201 tacccaccag aaattaatcc attgagaaca agaactactg cttctgccgt ttccacttgt 1261 accaattggt taaccaattt cgccgttgtt atgtttactc caccatttat ttctgctagt 1321 ggttggggtt gttatcttta ttttgccgtt atgaatttct tgtttgttcc aatcatcttt 1381 ttcttttatc cagaaactgc tggtagatca ttagaagaaa ttgatattat tttcgctaaa 1441 gcttacgttg aaaaaagaca accatggaga gttgctgcta ctttaccaaa attatcatta 1501 caagaagttg aagatgaatc taaaagcttg ggtctttatg atgatgattt cgaaaaagat 1561 aatttcgaaa ctaaagaaga tgtttctgat ggtactgctt caaacagtaa tggtgttttt 1621 gaaaaaccag aaaatgttta a