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LOCUS XM_712985 5673 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_712985 VERSION XM_712985.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 5673) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 5673) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 5673) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 5673) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 5673) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 5673) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712985.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..5673 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>5673 /gene="ALS9" /locus_tag="CAALFM_C603710WA" /db_xref="GeneID:3640281" CDS 1..5673 /gene="ALS9" /locus_tag="CAALFM_C603710WA" /note="ALS family cell-surface glycoprotein; expressed during infection of human epithelial cells; confers laminin adhesion to S. cerevisiae; highly variable; putative GPI-anchor; Hap43-repressed" /codon_start=1 /transl_table=12 /product="flocculin" /protein_id="XP_718078.2" /db_xref="CGD:CAL0000194750" /db_xref="GeneID:3640281" /translation="MLPQFLLLLLYLTVSTAKTITGVFNSFDSLTWTRSVEYVYKGPE TPTWTAVLGWSLNSTTADAGDTFTLIMPCVFKFITSQTSVDLTADGVSYATCDFNAGE EFTTFSSLSCTVNSVSVSYDKASGTVKLPITFNVGGTGSSVDLTDSKCFTAGKNTVTF MDGDTKISTTVDFDASPVSPSGYITSSRIIPSLNKASSLFVSPQCENGYTSGIMGFVT SQGATIDCSNINIGISKGLNDWNFPVSSESFTYTKTCSSSGIIVEYENVPAGYRPFVD AYISSENVEQYTLTYANEYTCKNGNTVVDPFTLTWWGYKNSEADSNGDIIVVTTKTVT ASTTAVTTLPFNPTVDKTETIEVLQPIPTTTITTSYIGISTSYETFTATIGGTATVIV DTPYHITTTVTTFWTGSVTTTTTYSNPTGSIDTVIVQIPSPDPTTTITEFWSESFAST TTVTNPPDGTNSVIIKEPYNPTVTTTEFWSESFASTTTITNPPDGTNSVIVKEPYNPT VTTTEFWSESFASTTTVTNPPDGTNSVIIKEPYNPTVTTTEFWSESFASTTTITNPPD GTNSVIVKEPYNPTVTTTEFWSESFASTTTVTNPPDGTNSVIIKEPYNPTVTTTEFWS ESFASTTTITNPPDGTNSVIVKEPYNPTVTTTEFWSESFASTTTITNPPDGTNSVIVK EPYNPTVTTTEFWSESFASTTTITNPPDGTNSVIVKEPYNPTVTTTEFWSESFASTTT ITNPPDGTNSVIVKEPYNPTVTTTEFWSESFASTTTVTNPPDGTNSVIVKEPYNPTVT TTEFWSESFASTTTITNPPDGTNSVIVKEPYNPTVTTTEFWSESFASTTTITNPPDGT NSVIVKEPYNPTVTTTEFWSESFASTTTITNPPDGTNSVIIKEPYNPTVTTTEFWSES FASTTTITNPPDGTNSVIIKEPYNPTVTTTEFWSESFASTTTVTNPPDGTNSVIIKEP YNPTVTTTEFWSESFASTTTVTNPPDGTNSVIIKEPYNPTVTTTEFWSESFASTTTVT NPPDGTNSVIVKEPYNPTVTTTEFWSESFASTTTVTNPPDGTNSVIIKEPYNPTVTTT EFWSESFASTTPSVSSFESKTFYSSEAQSSLEIDSSNTFMTSISVSTASSYDESSTIV SSAFPTLHISSYSLSTSFVPPVTLPRYVNTTISSSPSFESSSMYSSVTSAVTSIDNDR EVPTSTTTYLHSKLYSESISTVIQTKSSDWSLSLGNSNKPESASTVSEESLHYLSTPG PSSSEYSISFTSEKEGHVSSYVPRVSYTSSVKVSISSTMSSENGMSATHTFGISTNTI PSSTETSIKSATVTTPVSESTNTGMSIFMSTTTESKTTDITTETSVSGEVNLGSATVK VSSSEFISKGTVTRIMPTELTNSESTFTASPSFVLTSTESSVIETPATIEMSSRSSSY SVPLSKLRSEGETTRVIPTSSTATGSTVIGSPSSVSTSNESIITGSSSFVSTTAETIS TRSIVTESIVAGSPSLVLTTTVLDTTETTITETSIVGESSSRSLTFKASSLSKGEITG TVTPEMSVSTSKATTGTTSEVSIKESLTTKVPTFTSTTIKPETSETQHSESRTTQIPY SETKGSQLSTANSQVSQTGSSKSSIFESAISKDESTFVSATVKSITTPAVTQYQTSLP NPAVSVSEESGKKSSIIESQTENSATQHSIYFDSIETSTLSNTLANTLVSGAMKNSET TSELTTSDKAIGFSTTTETSIPGATNSALSPSVDSGKSSMLGWSGGIVSTVSTSTRLE DSTATSSSITAANQDSLNPSTVSKYPHGSETIDNGSNGSSHSSSALASTISASHSIKF SAHQTTLSQSLISSSTKTVIASTYDGSGSVIKLHSWFYGLVTIFFLFI" misc_feature 169..891 /gene="ALS9" /locus_tag="CAALFM_C603710WA" /note="Cell-wall agglutinin N-terminal ligand-sugar binding; Region: Candida_ALS_N; pfam11766" /db_xref="CDD:403080" misc_feature 1486..>2142 /gene="ALS9" /locus_tag="CAALFM_C603710WA" /note="Chitinase [Carbohydrate transport and metabolism]; Region: Chi1; COG3469" /db_xref="CDD:442692" misc_feature 2566..>3216 /gene="ALS9" /locus_tag="CAALFM_C603710WA" /note="Chitinase [Carbohydrate transport and metabolism]; Region: Chi1; COG3469" /db_xref="CDD:442692" misc_feature <3862..>4893 /gene="ALS9" /locus_tag="CAALFM_C603710WA" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature <4828..>5634 /gene="ALS9" /locus_tag="CAALFM_C603710WA" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" ORIGIN 1 atgctaccac aattcctatt gttattgcta tatttgacag tttcgactgc aaaaacgatt 61 accggtgttt tcaatagttt tgactcattg acatggacta gatccgttga atatgtttac 121 aaaggaccag agactccaac ttggactgca gttttaggct ggtccttaaa tagtaccact 181 gctgacgcag gagacacgtt taccttgatt atgccttgtg tgtttaaatt tataactagc 241 caaacatctg ttgatttgac tgctgatggt gttagctatg ccacttgtga ctttaatgct 301 ggtgaagaat ttacaacatt ttcttcctta tcatgtactg tgaacagtgt ttcagtatca 361 tatgataagg cttctggtac ggtcaaattg cccattacat tcaatgtggg tggaacaggt 421 tcgtcagttg atttgacaga ttccaaatgt tttactgccg gaaaaaacac tgtgactttc 481 atggatggcg atacaaagat ttctaccact gttgattttg acgcgtctcc agtatcaccc 541 agtggttata ttacaagctc acgaattatt cctagtctca ataaagcttc aagtcttttt 601 gtgctgccac aatgtgaaaa tggttacaca tctggtataa tgggatttgt aactagtcag 661 ggtgccacta ttgattgctc aaatatcaat atagggatat cgaaaggttt aaatgattgg 721 aattttccag taagttcaga atcatttact tacacaaaaa cttgttcgtc aagcggtatt 781 atagttgaat acgaaaatgt tcctgctggg tatcgtcctt ttgttgatgc atatatttct 841 tcagaaaatg ttgagcaata taccttgacg tacgcaaatg agtatacttg taaaaatggc 901 aatactgtgg ttgatccatt tactttaaca tggtgggggt ataaaaattc tgaagcagac 961 tctaacgggg atataatcgt agttacaacc aaaactgtta cagccagcac tacagccgtg 1021 actactttac ctttcaatcc aaccgttgat aaaaccgaaa caattgaagt tttgcaacct 1081 attccaacca ccacaattac aacttcatat attggtattt ccacttccta tgaaacattt 1141 accgcaacaa taggtggcac tgccacagtc attgtcgata caccctatca tatcactacc 1201 actgttacaa ctttctggac cgggtcagtt acaactacca ctacttatag taatcccact 1261 ggttccatag acactgttat tgtgcaaatt ccactgcctg atccaactac aactataact 1321 gaattttggt ctgaatcatt tgctagtact accactgtta ctaacccacc tgatggtact 1381 aacagtgtga tcatcaaaga accatacaac ccaactgtta ctacaactga attttggtct 1441 gaatcatttg ctagcactac caccatcacc aacccacctg atggtacaaa ctcagtcatt 1501 gttaaggaac catacaaccc aactgtgaca accactgaat tttggtctga atcatttgct 1561 agtactacca ctgttactaa cccaccagac ggtactaaca gtgtgatcat caaagaacca 1621 tacaacccaa ctgtgacaac tactgaattt tggtctgaat catttgctag cactaccacc 1681 atcaccaacc cacctgatgg tacaaactca gtcattgtta aggaaccata caacccaact 1741 gtgacaacca ctgaattttg gtctgaatca tttgctagta ctaccactgt cactaaccca 1801 ccagacggta ctaatagtgt gatcatcaaa gaaccataca acccaactgt tactacaact 1861 gaattttggt ctgaatcatt tgctagcact accaccatca ccaacccacc tgatggtaca 1921 aactcagtca ttgttaagga accatacaac ccaactgtga caaccactga attttggtct 1981 gaatcatttg ctagcactac caccatcact aacccacctg acggtacaaa ctcagtcatt 2041 gttaaggaac catacaaccc aactgttact acaactgaat tttggtctga atcatttgct 2101 agcactacca ccatcaccaa cccacctgat ggtacaaact cagtcattgt taaggaacca 2161 tacaacccaa ctgtgacaac cactgaattt tggtctgaat catttgctag cactaccacc 2221 atcaccaacc cacctgatgg tacaaactca gtcattgtta aggaaccata caacccaact 2281 gtgacaacca ctgaattttg gtctgaatca tttgctagca ctaccactgt caccaaccca 2341 cctgatggta caaactcagt cattgttaag gaaccataca acccaactgt gacaaccact 2401 gaattttggt ctgaatcatt tgctagcact accaccatca ccaacccacc tgatggtaca 2461 aactcagtca ttgttaagga accatacaac ccaactgtga caaccactga attttggtct 2521 gaatcatttg ctagcactac caccatcacc aacccacctg atggtacaaa ctcagtcatt 2581 gttaaggaac catacaaccc aactgtgaca accactgaat tttggtctga atcatttgct 2641 agtactacca ccatcactaa cccacctgat ggtactaaca gcgtgatcat caaagaacca 2701 tacaacccaa ctgttactac aactgaattt tggtctgaat catttgctag cactaccacc 2761 atcaccaacc cacctgacgg tactaacagt gtgatcatca aagaaccata caacccaact 2821 gttactacaa ctgaattttg gtctgagtca tttgctagta ctaccactgt caccaaccca 2881 cctgatggta ctaacagtgt gatcatcaaa gaaccataca acccaactgt gacaaccact 2941 gaattttggt ctgaatcatt tgctagtact accactgtca ccaacccacc tgatggtact 3001 aacagtgtga tcatcaaaga accatacaac ccaactgtga caaccactga attttggtct 3061 gaatcatttg ctagtactac cactgttact aacccaccag acggtacaaa ctcagtcatt 3121 gttaaggaac catacaaccc aactgtgaca accactgaat tttggtctga atcatttgct 3181 agtactacca ctgtcaccaa cccacctgat ggtactaaca gtgtgatcat caaagaacca 3241 tacaacccaa ctgtgacaac cactgaattt tggtctgagt catttgctag tactacacca 3301 agtgtttcca gttttgaatc gaaaacattt tactcatcag aagcacagtc gagtttagaa 3361 attgattcga gtaatacctt tatgacgtcg atttcagtta gcaccgcatc atcatatgac 3421 gagagttcaa ccattgtttc atctgcattc ccaactttgc acatttcttc atactctttg 3481 tcaacaagtt ttgttccacc tgttacactt ccacgctatg tcaacaccac aatctccagt 3541 tcaccatcct ttgaatcgtc atctatgtat tcatcagtca ctagtgcggt cacttccatt 3601 gataatgata gagaggtgcc aacttcaacg accacctact tgcactcgaa attgtattcc 3661 gaatcaattt ctactgttat tcaaactaaa tcttcagatt ggtctttatc attaggaaac 3721 tcgaacaagc cagagtctgc tagtacagta tcagaagaga gtttgcatta cttgtctact 3781 ccaggaccat catctagtga atactcaatt ctgtttacaa gtgaaaagga aggtcatgtt 3841 agttcctacg ttccaagggt atcttacacg tcgagtgtta aagttagcat tagctctact 3901 atgtcatctg aaaatggaat gagtgctact cacacatttg gcatttcaac aaatacaatt 3961 ccttcaagta ctgaaacatc tattaaatcg gcaactgtca caacaccagt ttctgaatcc 4021 acgaatactg gaatgtcaat atttatgtca acaactactg aatcaaaaac aactgacatt 4081 accactgaaa catctgtttc tggggaagtg aacttgggat cagcaaccgt taaagtttca 4141 tcatcagaat ttattagtaa aggaacggtt actagaataa tgcctactga acttacaaat 4201 tccgaatcaa catttactgc gtcaccatct ttcgtgttga caagtactga atcaagcgtt 4261 attgaaacac cagctacgat agaaatgagt tccagatcat catcttatag tgtgccattg 4321 tcaaaattac gaagtgaagg agaaactacc agagtaatac ctactagctc aacagctact 4381 ggatctactg tcattggatc accatcatct gtatcgacaa gtaatgaatc gataattact 4441 ggatcttcat catttgtgtc tacaactgct gaaacaattt ccactagatc catagttact 4501 gaatcaattg ttgctggatc cccatcatta gtattgacaa ctaccgtttt ggacacaact 4561 gaaacaacaa ttacagaaac atcaattgtc ggtgaactga gctccagatc attaactttc 4621 aaagcctcat cactaagcaa aggagaaatt actggaactg taacaccaga aatgtcagtt 4681 tcaactagca aagcaactac tggcacgact tctgaagtat ctattaaaga gtcattaacc 4741 acaaaagttc ctacttttac atcaacaaca attaaaccag agacttctga aactcaacac 4801 tctgaatcaa gaactactca aattccatat tcagaaacaa agggttctca attatctaca 4861 gctaattcac aagtttctca aactggaagc tccaagtctc tgatttttga atcggcaata 4921 tcaaaagatg aaagtacttt cgtttcagcc actgtgaaat caattaccac cccagctgtc 4981 actcaatatc aaacttcatt gccaaatcca gcagtttcag tttctgaaga atcaggcaag 5041 aaactgtcaa tcattgaaag ccaaactgaa aattcagcaa ctcaacatag tatttacttt 5101 gatagtattg aaacactgac cttgtcaaac actttagcaa acactttggt ctctggtgct 5161 atgaagaatt cagaaacaac ttcagaattg actacttctg ataaagctat tggtttttcc 5221 acaacaacag aaacttcaat tcctggtgca acaaattctg ccttgagtcc atctgttgat 5281 tctggtaaaa gttcgatgtt aggatggtct ggtggaattg tctcaactgt ttcaacttca 5341 acaagattag aagattctac tgccaccctg agttccataa ctgcagctaa tcaagattca 5401 ttaaaccctt caactgtcag caaataccct catggatctg agactattga taatggatca 5461 aatggttctt cacattctag ttctgcctta gcatctacta tttcagctag ccacagtatt 5521 aaatttagtg ctcatcagac tacattaagt cagctgttga tatcatcttc aaccaaaaca 5581 gttattgctt ctacatacga tggttctggt tcggttatca aactccattc ttggttttat 5641 ggattggtca caatattctt tttgtttatt taa