Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_712980 1191 bp mRNA linear PLN 18-APR-2022 protein (CDC50), partial mRNA. ACCESSION XM_712980 VERSION XM_712980.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1191) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1191) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1191) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1191) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1191) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1191) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712980.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1191 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1191 /gene="CDC50" /locus_tag="CAALFM_C603660CA" /db_xref="GeneID:3640302" CDS 1..1191 /gene="CDC50" /locus_tag="CAALFM_C603660CA" /note="Putative endosomal protein; induced by Mnl1p under weak acid stress" /codon_start=1 /transl_table=12 /product="aminophospholipid translocase regulatory protein" /protein_id="XP_718073.2" /db_xref="CGD:CAL0000197808" /db_xref="GeneID:3640302" /translation="MNFLRKRRSSEDEDDDDILNNDPTSSIHKSRKPPNTAFRQQRLK AWQPILTPKSVIPLLILIAIILTPLGIAIIYTTYNVQDLIVDYSKCNEASNSYENIPN KYTGYHFRGHSANPNFQWRFENNNTCVIQFNLAQDLKGPVYLYYKLTNFYQNHRKYVE SYDLEQLRGEALSSDDVTDNCKPLKHRVYNGEEKLIYPCGLIANSYFNDTISNPVLLN TRNGDNNETYIFSDKGISWPSDRSHKFKKTQYSPDEVVPPPNWDEMYPNGYTKDNMPD LQTWEHLQNWMRTAALPSFYKLYGQNTTQSMSSGIYQISIKMNYPVEIFGGSKSIVIT TNTIFGGRNMSLGVIYIIVAVVALVLGIAFLLQYLIKPRKMGDHDYLQDSNGGDITTY RDQL" misc_feature 85..1143 /gene="CDC50" /locus_tag="CAALFM_C603660CA" /note="Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]; Region: CDC50; COG5035" /db_xref="CDD:227368" ORIGIN 1 atgaatttct tgcgcaaaag aaggtcttca gaagatgagg atgatgatga cattttgaac 61 aatgatccta ccagctctat tcataaatca agaaagcctc ctaatactgc attcagacaa 121 caacgattga aagcctggca accaatatta acaccaaagt cagtaatacc attattgata 181 ttaatagcca taatattgac tccgctaggc atagccataa tttatacgac atacaacgta 241 caggatctta ttgttgatta ttccaagtgt aacgaagcct cgaatagtta tgaaaatatc 301 cctaacaagt acactggata tcatttccgt ggtcatagcg ccaaccccaa ttttcaatgg 361 cgtttcgaga ataacaacac ctgtgtaata caattcaatc ttgctcagga cttgaaaggt 421 ccagtatact tgtactacaa attgacgaat ttttatcaaa atcatcgtaa atatgttgaa 481 agttacgatt tagaacaatt acgaggggag gccttgtcaa gtgatgatgt tactgataac 541 tgcaagcctt tgaaacatcg tgtatataat ggagaggaaa aacttattta tccttgtgga 601 ttaattgcaa acagttattt caacgatacc atatccaacc ctgtgttgtt gaataccagg 661 aatggtgata acaacgaaac ttatatattt agcgataaag gaatatcttg gccactggat 721 cgtagtcaca agtttaaaaa gacacagtat tcaccagacg aagtagtccc cccaccaaat 781 tgggatgaga tgtaccccaa tggttataca aaagacaata tgcccgattt acaaacctgg 841 gaacatttgc aaaactggat gagaactgcg gctctacctt cattttataa gttatatgga 901 caaaatacca ctcaatcaat gtctagtggt atttatcaaa tcagtattaa aatgaactac 961 cctgttgaaa tatttggtgg gtccaagagc atagtgataa ctacaaacac catattcgga 1021 ggaagaaaca tgagtttagg ggttatttac attatagtgg cagtggttgc cttggtttta 1081 ggaattgcat ttttgttgca atacttgata aaacctagaa aaatgggtga tcatgattac 1141 ttgcaagact cgaatggtgg tgacataact acctatagag atcaattata a