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LOCUS XM_712974 1965 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_712974 VERSION XM_712974.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1965) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1965) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1965) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1965) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1965) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1965) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712974.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1965 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1965 /gene="FGR17" /locus_tag="CAALFM_C603610WA" /db_xref="GeneID:3640296" CDS 1..1965 /gene="FGR17" /locus_tag="CAALFM_C603610WA" /note="Putative DNA-binding transcription factor; has zinc cluster DNA-binding motif; lacks an ortholog in S. cerevisiae; transposon mutation affects filamentous growth; Hap43p-repressed gene" /codon_start=1 /transl_table=12 /product="Fgr17p" /protein_id="XP_718067.2" /db_xref="CGD:CAL0000179987" /db_xref="GeneID:3640296" /translation="MSSKSRSYVSIACDNCRKRRRKCNGELPCHYCSGKNKPCVYDKT KDKRRRRVDLVYVDYLEHKYNNLLNFVKRIRSTTKDERLRAQCNEMLANNDPKFIDNK DLGLSNDESTHNNQSDKQQKEIIQLDNPMDELVSMKWELKFDESGNTKFLGPPVRQVD RCLVKDSMVAMEDPERVSYFNETVLADTEFMKELINTFFQNLLPFNLVLEEINVDEIT REITSMTGKRSCYEAVSCLHLLALAILAYGFSILPKDHPYFQNLNGWNPFLSIVERSL FKLLRKSSHTTTGNLIDHSHIVYTILIITILHLGNYDESQAWVYSSILCSQIQHVGWN VSTDYPSESNDLSKFRSKLFWNCLVVEKISASMFGRSSPINFRQLLTDFYTSETKDIN ELVFQFNSKLWFIYDKFMGQVYSFHFNTQNKMLYKKVLMTATQSFQDFQGFMNQYLPL NETNLDNQNIILLHLTFHVFLLLIIRPYMKMPEIAGSIFQKSISITEQCYILINQYNS KFGNGVTTGWYNCHYGFLLYQVSVFLLCAIPVHDSVGPPGQHNVLIQRLHLFLQCLKN GSKYLPVYNVYYQTLLNIFNNMTLDEEISILVRQAYENESIEVKTSSVEKEDLVLDFD QDWQSYVNSLNLELNQDVYSYLEEGILDML" misc_feature 34..144 /gene="FGR17" /locus_tag="CAALFM_C603610WA" /note="Fungal Zn(2)-Cys(6) binuclear cluster domain; Region: Zn_clus; pfam00172" /db_xref="CDD:395120" misc_feature order(34..36,49..60,64..66,73..75,100..102) /gene="FGR17" /locus_tag="CAALFM_C603610WA" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238023" misc_feature order(37..39,46..48,67..69,85..87,94..96,115..117) /gene="FGR17" /locus_tag="CAALFM_C603610WA" /note="Zn2+ binding site [ion binding]; other site" /db_xref="CDD:238023" misc_feature 559..1770 /gene="FGR17" /locus_tag="CAALFM_C603610WA" /note="fungal transcription factor regulatory middle homology region; Region: fungal_TF_MHR; cd12148" /db_xref="CDD:213391" ORIGIN 1 atgctgtcaa aatctagatc ttacgtttca attgcttgtg ataattgtcg taaacgtaga 61 agaaaatgta atggagaact tccgtgtcat tattgttcag ggaaaaacaa accatgtgta 121 tatgacaaga ccaaagataa acgaagacga cgagtagatt tagtttatgt tgattattta 181 gaacacaagt ataacaatct actcaatttt gtcaaaagaa tacgatcaac tactaaagat 241 gaacgattac gtgctcaatg taatgaaatg ttggctaata atgatcccaa attcattgat 301 aataaagatc ttggattatc aaatgatgag ctgacccata acaatcaatc cgacaaacaa 361 caaaaggaga tcattcaatt ggataaccct atggatgagt tggtgtctat gaaatgggaa 421 ttgaaatttg atgaatctgg caatacaaag ttcttgggtc ctccagttcg acaagttgac 481 cgatgtttgg tcaaagacag tatggtagcc atggaagacc ccgaaagagt atcctatttt 541 aatgaaacag tattggcaga cacagaattc atgaaagaac taataaacac attttttcaa 601 aatttgttgc catttaattt agtacttgaa gagatcaatg ttgacgagat tacccgagaa 661 atcacatcaa tgacaggtaa acgtagctgt tacgaagcag tgagttgttt acatttatta 721 gcattggcta ttttagctta tggatttagt atactaccaa aagatcatcc ctatttccaa 781 aacttaaacg gatggaaccc atttttgtca atagttgaaa gatcattatt taaactactt 841 cggaaatcat ctcacacaac cactggtaat ttaattgatc attcacatat agtttacacc 901 attttgatta ttacaatttt gcatttggga aattatgatg aatctcaggc ttgggtttat 961 tcctcaatac tttgttctca gattcaacat gttggttgga atgtttcaac tgattatcca 1021 ctggaatcga atgacctatc taaattcaga tcaaaactat tttggaattg tttagtggtg 1081 gaaaagatat cggcatcgat gtttggacgt agttcaccaa taaatttccg acaactttta 1141 acagatttct acacttcaga aactaaagat atcaatgaac ttgttttcca attcaatagt 1201 aaactttggt ttatatatga taagtttatg ggacaggttt attcatttca tttcaacacc 1261 cagaataaaa tgctatataa aaaagtctta atgacggcaa ctcaaagttt ccaagatttc 1321 caaggattta tgaatcaata tttgccatta aatgaaacta accttgacaa ccagaatata 1381 atcttactac atttgacttt ccatgtgttt ttattgttaa taattcgtcc atatatgaaa 1441 atgccagaga ttgctgggtc catatttcag aaaagtatat ctattaccga acagtgttat 1501 attcttataa accaatataa tagcaaattt ggcaatggag tgacaacagg atggtacaat 1561 tgtcattatg ggtttttatt gtatcaagtt tcagtgttct tgttatgtgc tattcctgta 1621 catgattctg ttggccctcc aggacaacac aatgtattaa ttcaacgttt gcatttattt 1681 ttacaatgtt tgaaaaatgg atcaaaatat ttacctgttt ataatgtcta ttaccaaact 1741 ttgttaaaca tatttaataa tatgactctc gatgaggaaa tttcgatttt ggtgagacaa 1801 gcgtatgaaa atgaatcaat tgaagtgaag acaagtagtg ttgaaaaaga agatttggta 1861 cttgattttg atcaagattg gcaatcatac gtgaactctt taaacttaga gttgaatcaa 1921 gatgtctata gttatttaga agaaggcata cttgatatgt tatga