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LOCUS XM_712972 690 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_712972 VERSION XM_712972.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 690) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 690) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 690) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 690) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 690) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 690) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712972.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..690 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>690 /locus_tag="CAALFM_C603590CA" /db_xref="GeneID:3640251" CDS 1..690 /locus_tag="CAALFM_C603590CA" /note="Ortholog of C. dubliniensis CD36 : Cd36_64130, C. parapsilosis CDC317 : CPAR2_601230, Candida tenuis NRRL Y-1498 : CANTEDRAFT_115908 and Debaryomyces hansenii CBS767 : DEHA2E12540g" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_718065.2" /db_xref="CGD:CAL0000178786" /db_xref="GeneID:3640251" /translation="MPSSERDTLLAESKTILKSVTNWKPGKQFKSNVIPETITTSTYS TTNIKDNQFWCARESLIPSTYKQKVIDCLIGTANIGSTHSDHEVNYVEEFDSLKISNV TEYPDGGWSYELHANYKFGTIGISNRMFYESVHIYKFDKSNQTEEDDKDTNCAYIISV PIDGPTGNFVIGKYHSIEKISWSDNKDSDLKWIMATTSDAGGYLPRWLTNMILPGAIS NDVPSVLKYIQ" misc_feature 64..684 /locus_tag="CAALFM_C603590CA" /note="START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily; Region: SRPBCC; cl14643" /db_xref="CDD:472699" misc_feature order(346..348,352..354,358..360,385..393,397..402, 409..411,457..459,463..465,469..471,475..477,499..501, 505..507,511..516,520..522,532..537,541..543,547..549, 574..576,580..582,586..588,592..594,610..624,631..636, 643..651,661..663) /locus_tag="CAALFM_C603590CA" /note="hydrophobic ligand binding site [active]" /db_xref="CDD:176854" ORIGIN 1 atgcctagtc tggaaagaga tactttatta gctgaatcaa agactatttt aaaatccgtg 61 acaaattgga aaccaggtaa acaattcaaa tcaaatgtta tcccggaaac aatcaccaca 121 tcaacatatt ccaccacaaa tatcaaagat aatcaatttt ggtgtgctcg agaatcatta 181 atcccttcaa cttataaaca aaaagtcatt gattgcctaa ttggtactgc aaatattgga 241 tcaactcatt ctgatcatga agtaaattat gttgaagaat ttgattccct aaagatttca 301 aatgtaaccg agtatcccga tggtggttgg agttatgaat tacatgcaaa ctataagttt 361 ggtaccattg gcataagtaa taggatgttt tatgaatcgg ttcatattta caaatttgac 421 aagagcaacc aaactgagga agatgacaaa gacaccaatt gtgcatatat tataagtgtg 481 cctatagatg gtcctactgg aaattttgtc attggtaaat atcattcaat tgaaaaaata 541 tcatggagtg ataataaaga ttcggacttg aaatggatta tggcaactac atcagatgct 601 ggtggatatt tacctcgctg gttaacgaat atgattttac caggagcaat ttctaatgat 661 gtaccaagtg tattaaaata tatacaataa