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LOCUS XM_712971 2082 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_712971 VERSION XM_712971.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2082) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2082) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2082) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2082) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2082) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2082) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712971.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2082 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2082 /locus_tag="CAALFM_C603580WA" /db_xref="GeneID:3640250" CDS 1..2082 /locus_tag="CAALFM_C603580WA" /note="Ortholog(s) have Rab guanyl-nucleotide exchange factor activity, phosphatidylinositol-3-phosphate binding, phosphatidylinositol-5-phosphate binding, phosphatidylserine binding activity" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_718064.2" /db_xref="CGD:CAL0000179558" /db_xref="GeneID:3640250" /translation="MNNYFTKYIPNIRLSNTGDSDDHTIGNSTNSLPHINYIIIFNPT FVSPKAESDEELIKQIIVFLQGKDLPESQFSQIEQLKLIGLLRGIESLGESFSNSTTS TTTGKKPTILKSLDSSTVMIELESNYFLACNITISSQINDQTVNGINQQLLKSIMQSQ RYFELFNKSIDYTYNQYGINYLQDSLKSFWQNFLTMYNSQSIKIPISPTSLINWFNGL NYQGFLGLLPYTQYKKSSIIINQQIREDIELFMNDNKSVSGVLINYFNLKLPKRHGVV YMNTIGNKYIDNDGLIDIYNWLEYNQYHDNLSNLNNGGVLSSNLSVASSPPQEGENQD GNTSDGTADTQFGFDVSSGLRVLNPVNLTNNLVISPINYTVSTVMEGTQVSNWLAMPQ FIKKLTVGDDNETAELPPDQTADINENRSEEDEDDLSGEFIIGLQSDGSISRQVIYLK TTDSIYQEHQLVTYHKDDIYVTLVCESSDPKLDSSGFYKSLETSLLNPIIEQIETVAM GGSMLQTSVNSIRSLYVPNDIDQDFFYITCNPKQRNFQSSLPYLPHLSNMNSDTLTKY QLTALYYLHDQLSNIFQPTFFENQLHEFFHKFTSNKLNDWMFYYIKYQDKYIIIMKNK SKNTTSVLTNNQLSASVPPTIERSIVNRISEGVLDYTKLGFLENLGDDVKYWLGTQQE DLESIEQVSLS" ORIGIN 1 atgaacaatt actttacaaa atatatacct aatataagat tgtctaatac aggtgattct 61 gatgatcata ctattggcaa ctcgaccaac agtctaccgc atataaatta cataattatt 121 tttaatccaa catttgtgtc tcccaaagcc gaatctgatg aagaattaat taaacaaatt 181 atagttttcc tacaaggtaa agacttgcca gaatcacaat tttcacaaat agaacaattg 241 aaattaattg gtttattgag aggaattgaa tcgcttggtg aaagtttttc caattcaacc 301 acgtccacaa caacaggtaa aaaaccaaca attcttaaat cattggattc ctcaactgta 361 atgatagaat tggaatccaa ctatttttta gcttgcaata tcacaatcag ctctcaaatc 421 aatgatcaaa ctgtcaacgg gattaaccaa cagttactaa aatcaattat gcaatcacaa 481 cgatattttg aattattcaa taagtccata gattacactt ataatcaata tggaattaat 541 tatttacaag atagtttaaa atcattttgg caaaattttt taacaatgta taattcccaa 601 tcaataaaga ttcctataag tccaacatca ttaataaatt ggtttaatgg tttgaattat 661 caagggtttt tgggattatt accttatacg caatacaaaa aatcgtcaat tattataaat 721 caacaaataa gagaagatat tgaattgttt atgaatgata ataaatctgt ttcaggtgtc 781 ttgataaatt attttaatct taaactaccg aaacggcatg gtgtggtgta tatgaatacc 841 attggaaaca aatatattga taatgatggg ttaattgata tttataattg gttggaatat 901 aaccagtatc atgataattt gtcaaatttg aataatggcg gtgttttaag tagtaattta 961 tctgtggcat catcaccgcc gcaagagggt gaaaatcaag atggaaatac ttctgacggt 1021 acagcagata cacaatttgg atttgatgtc agtctgggat taagagtttt gaatccagtc 1081 aatttgacaa ataatttggt tatttcccca ataaattaca cagtatcaac tgtaatggag 1141 ggaacacaag tatctaattg gttggctatg cctcagttta ttaaaaaatt gactgttggt 1201 gatgacaacg aaacagcaga attacctcca gatcaaacag ctgatatcaa cgaaaataga 1261 agtgaagagg acgaagatga cttatcaggg gagtttatta taggactaca atctgatggg 1321 agtatcctga gacaagtcat ttatttgaaa actacagatt ccatttatca agaacaccaa 1381 ttggtgacct atcataaaga tgatatatat gttactttgg tatgcgaatc aagtgatcca 1441 aagcttgatc tgtctggatt ttataaatca ttggaaactt cattgcttaa cccaattatt 1501 gaacaaattg aaactgttgc tatgggtgga agtatgttac aaacaagtgt aaactcaata 1561 cgatcattgt atgttcctaa tgatattgat caagatttct tttacattac atgtaatccg 1621 aaacaaagaa atttccaaag ttcattacct tatttaccac atctttcaaa tatgaatagt 1681 gatacattga ccaaatatca actaacggca ttatattatt tacatgatca attgagtaat 1741 attttccaac cgacattttt cgaaaaccaa ctccatgaat ttttccataa attcaccagt 1801 aataaattaa atgattggat gttttattat attaaatatc aagacaagta tatcattatc 1861 atgaaaaata aaagtaaaaa tacaacctca gtattgacca acaatcaatt gtctgcaagt 1921 gtaccaccca ccattgaaag atcaatagtc aatagaatat ctgaaggggt attagattat 1981 actaaattgg ggtttttaga gaatcttgga gatgatgtaa agtattggtt aggtactcaa 2041 caagaagatc tagagtcaat agaacaggtt tctttactgt ga