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LOCUS XM_712968 1992 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_712968 VERSION XM_712968.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1992) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1992) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1992) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1992) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1992) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1992) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712968.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1992 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1992 /gene="POX1" /locus_tag="CAALFM_C603560WA" /db_xref="GeneID:3640247" CDS 1..1992 /gene="POX1" /locus_tag="CAALFM_C603560WA" /note="Predicted acyl-CoA oxidase; regulated upon white-opaque switch; upregulated upon phagocytosis; Spider biofilm induced" /codon_start=1 /transl_table=12 /product="Pox1p" /protein_id="XP_718061.2" /db_xref="CGD:CAL0000201368" /db_xref="GeneID:3640247" /translation="MTTELQKEREQIKFNPKEVNYFLEGSKERSDIVSNLVEQMEKDP VLKVDASYYNLTKEEQREDTAKKIDRISRYFENEFPDQQAQRLSILGVFDPQVFTRIG VNLGLFVSCIRGSGTNSQFFYWTINKGVDKLRGIYGCFGMTELAHGSNVQGIETTATF DKETDEFVINTPHIGATKWWIGGAAHSATHCTVYARLKVNGKDYGVKTFVVPLRDSNH DLMPGVTVGDIGAKMGRDGIDNGWIQFSNVRIPRFNMLQKYAKVSREGEVTMPPSEQL GYSALIGGRVTMMMDSYRMTSRFVTIALRYAIFRRQFKSKISGGDQETKLIDYPLHQK RLFPYLAAAYLFSQGALYLEQTMNETNERLDDAVSEGDKKKIDEAIVASKKLFVASGC LKSTCTWLTADAIDQARQACGGHGYSSYNGFGKAYSDWVVQCTWEGDNNMLAINVAKP MVKEILQEPEQKGLVIANVSDLNDPAKLDKAFEHALSGLARDIGAVAKDQGYDVTGPS LVLVSKLNAHKFLIDGFFKRITPEFAPILKPLGFLYADWIIETFSSVFLSYGVIAPEV IKKISSEHFPVLAKQIRPNVAGLTDAFNLSDMLTNAAIGRADGNVYDHYFETVKKLNP PENTKAPYSQALQDMLNRPSVEERQRGERSEEAAEILSS" misc_feature 13..1863 /gene="POX1" /locus_tag="CAALFM_C603560WA" /note="Acyl-CoA dehydrogenase; Region: ACAD; cl09933" /db_xref="CDD:447864" misc_feature order(319..321,418..420,424..426,538..540,544..546, 1303..1311,1315..1317,1321..1323) /gene="POX1" /locus_tag="CAALFM_C603560WA" /note="active site" /db_xref="CDD:173838" ORIGIN 1 atgactactg aacttcaaaa agaaagagaa caaattaaat tcaatcctaa agaagtcaac 61 tattttttgg aaggatctaa agaaagatca gatattgtca gcaatcttgt tgaacaaatg 121 gaaaaagatc cagtattaaa ggtcgatgcg tcatactata acttgactaa agaagaacaa 181 agagaggata ctgctaagaa aattgacaga atttcaagat attttgaaaa tgaattccca 241 gatcaacaag cacaaagatt atctattctt ggtgttttcg atcctcaagt tttcactaga 301 attggtgtca atttgggttt atttgtttct tgtattcgtg gtagtggtac caactcccaa 361 tttttctact ggactattaa caaaggtgtt gataaactcc gtggtatcta tggttgtttc 421 ggtatgactg aattggccca tggttccaat gttcaaggta ttgaaactac tgctactttt 481 gacaaagaaa ctgacgaatt tgtcattaat actcctcaca ttggtgctac taaatggtgg 541 attggtggtg ctgctcattc tgctacccat tgtaccgttt atgctagatt gaaggttaac 601 ggtaaagatt acggtgtcaa gacatttgtt gtcccattga gagactccaa tcacgatctt 661 atgccaggtg tcactgttgg tgatattggt gccaagatgg gtagagatgg tattgataat 721 ggttggattc aattctccaa tgtcagaatc ccaagattca acatgttgca aaaatatgct 781 aaagtttctc gtgaaggtga agtcactatg cctccatccg agcaattagg ttattctgca 841 ttgattggtg gtagagttac catgatgatg gactcttata gaatgaccag tagatttgtt 901 actattgcct tgagatatgc cattttcaga agacaattca agagtaagat ttctggtggc 961 gaccaagaaa ctaaattaat agattaccca ttgcatcaaa agagattatt cccatatttg 1021 gctgctgctt atttgttctc acaaggtgcc ttgtacttgg aacaaactat gaatgaaacc 1081 aacgaaagat tagatgatgc cgtttctgaa ggtgacaaga aaaaaatcga tgaagctatt 1141 gttgcttcca agaaattgtt tgttgcctct ggttgtttga aatctacttg tacttggtta 1201 actgctgatg ccattgatca agctcgtcaa gcttgtggtg gtcatggtta ctcttcgtac 1261 aatgggtttg gtaaagctta ttcagattgg gttgtccaat gtacttggga aggtgacaat 1321 aacatgttag ccattaatgt tgccaaacca atggttaaag aaatcttaca agaaccagaa 1381 caaaaaggtt tggttattgc taatgtttcc gatttgaatg acccagctaa attggacaaa 1441 gcttttgaac atgctctttc tggtttggct agagatattg gtgccgttgc caaagaccaa 1501 ggttatgatg tcactggtcc aagtttggtt ttggtttcca aattgaatgc tcataaattc 1561 ttgattgatg gattcttcaa acgtattact ccagaatttg ctccaatctt gaaaccattg 1621 ggattcttgt acgctgattg gatcattgaa actttcagtt ctgtgttttt atcttatggt 1681 gttatcgctc cggaagtgat taaaaagata tcctcagaac atttcccagt attagctaaa 1741 caaatcagac caaatgtcgc tggtttgact gatgctttca acttgtctga tatgttgact 1801 aatgctgcta ttggtagagc cgatggtaat gtatacgatc actactttga aactgttaaa 1861 aaattgaacc cacctgaaaa cactaaagca ccatattcac aagcattaca agatatgttg 1921 aaccgtccat cagttgaaga aagacaaaga ggtgaaagat ctgaagaagc tgctgaaatt 1981 ttatctagtt ag