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LOCUS XM_712959 1869 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_712959 VERSION XM_712959.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1869) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1869) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1869) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1869) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1869) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1869) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712959.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1869 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1869 /gene="YMX6" /locus_tag="CAALFM_C603480WA" /db_xref="GeneID:3640255" CDS 1..1869 /gene="YMX6" /locus_tag="CAALFM_C603480WA" /note="Putative NADH dehydrogenase; macrophage-downregulated gene; induced by nitric oxide; rat catheter biofilm induced" /codon_start=1 /transl_table=12 /product="Ymx6p" /protein_id="XP_718052.2" /db_xref="CGD:CAL0000180384" /db_xref="GeneID:3640255" /translation="MRSAIKPIIIRNLGWRTHAQTHFHTLVGFRFCYIRWAYFEFQLL LFDFLLPSKGPQNLNIINTDYKKKSFLSTSFSLLLSYRRITFSNKKNTMSSKTVPRFP IIRKFFKYTLSGVALTVVGGTSFIAYKVYQESQPVDQIKQSPYFPNGQPKKSIVILGS GWGAVSLLKNIDTSLYNVSVVSPRNYFLFTPLLPSVPTGTVDMRSIIEPIRSMIRRCR GEVNYYEAEAIGIDPVNNKLTIQQSTTVHSGHSGDDTSSNDPKIHQEHKMEHITTELN YDYLVVGVGAQPSTFGIPGVAEHSTFVKEVRDSIKIKKKIIDLIEAANLLPVGDPDRK RLLHIVVCGGGPTGVEAAGEIQDYIDQDLKKWMPQIAKDMKVSLVESQPVVLHTFSSE LVEYTNHIFKDTNINLVTNSRIVKVDDTHVDVMRKSDKSIDKVPYGMLIWATGNSVRG FTKIIMDKFSEQQTSPRGLLVDDQLKLKGSDNIYALGDCTFTKYAPTAQVAFQQGIYL AHYFEKLQKVEKLRYKIKQDPSISEVYVHRLQRLENSLPKFVYNYRGSLAYIGSEKAV ADLAVGSWSNLSSGGNLTFLFWRSAYIMMCLSIKNQVLVCFDWIKVYLFGRDCSRE" misc_feature 454..1863 /gene="YMX6" /locus_tag="CAALFM_C603480WA" /note="NADH dehydrogenase-like protein; Provisional; Region: PTZ00318" /db_xref="CDD:185553" ORIGIN 1 atgcgcagtg cgataaagcc gataattatc cgaaatctag gatggcgcac ccacgcacag 61 acgcatttcc atacattagt gggttttagg ttttgttata tccgatgggc atatttcgaa 121 tttcaattat tgctctttga ctttctactt ccttctaaag gtccacaaaa tctaaatata 181 ataaacacag attataaaaa aaaactgttt ctttctactt ctttttcttt acttctttct 241 tatagaagaa tcaccttttc aaataaaaag aacaccatgt catctaaaac tgttcctcga 301 tttccgatta ttcgaaaatt ttttaaatat accttatctg gtgtggcatt aactgtggtt 361 ggtggaactt cctttattgc ttataaagta tatcaagaat cacaaccagt tgatcaaatc 421 aaacaatcac catatttccc taatggacaa cctaaaaaat ctattgtcat tttaggatcc 481 ggttggggtg ctgtttctct tttgaaaaat attgatacta gtttatataa cgtatcggtg 541 gtatcaccaa gaaattattt ccttttcacg ccattattac ctagtgtccc aactggtacg 601 gttgatatga gatcaattat tgaacctatt agatcaatga ttagaagatg tcgtggagaa 661 gtgaattatt atgaagcaga agcaattggt attgatccag tgaataacaa attaacaatt 721 caacaatcaa caacggttca ttcaggacat tctggagatg atacgtcatc caacgaccct 781 aagatccatc aagaacataa aatggaacat atcactactg agttaaacta tgattatttg 841 gtggttggtg ttggtgcaca accatccact tttggtatcc ctggggtggc tgaacattca 901 acatttgtta aagaagtacg cgattcaatt aaaattaaaa agaaaattat cgatttaatt 961 gaagctgcca atttattacc agttggtgat cctgatcgta aacgtttatt acatattgtt 1021 gtttgtggag gtggaccaac tggggtagaa gctgccggag aaatccaaga ttatattgat 1081 caagatttga aaaaatggat gccacaaatt gccaaagata tgaaagtatc attagtagaa 1141 agtcaaccag tagttttaca cacttttagt tccgaattag tcgaatatac caaccacata 1201 ttcaaagata ccaatatcaa tttagtcacc aattcaagaa tcgttaaagt tgatgatact 1261 catgttgatg ttatgcggaa aagtgataaa tcaatcgata aagtacctta tggaatgctt 1321 atttgggcca ctgggaattc tgtacgtgga ttcaccaaaa ttataatgga taaatttagt 1381 gaacaacaaa ctagtcctcg tggattatta gttgacgatc aattaaaatt aaaagggtcc 1441 gataatattt atgctttggg tgattgtaca tttactaaat atgctccaac tgctcaagta 1501 gctttccaac aagggatata tttagcacat tattttgaga aattacaaaa agttgaaaaa 1561 ttacgataca aaatcaaaca agatccttca attagtgaag tttacgtaca tagattacaa 1621 cgattagaaa actccttacc gaaatttgtt tataattata gaggttcttt ggcttatatt 1681 gggtcagaaa aagccgtggc agatttagcg gttgggtctt ggtctaatct ttcttctggt 1741 ggtaatttga catttttatt ttggagatca gcttatataa tgatgtgttt atcaatcaaa 1801 aatcaagttt tggtttgttt tgattggata aaagtttatt tatttggtag agattgttct 1861 agagagtag