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LOCUS XM_712954 2586 bp mRNA linear PLN 18-APR-2022 ACCESSION XM_712954 VERSION XM_712954.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 2586) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 2586) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 2586) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 2586) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 2586) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 2586) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712954.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..2586 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>2586 /gene="NAM2" /locus_tag="CAALFM_C603450CA" /db_xref="GeneID:3640275" CDS 1..2586 /gene="NAM2" /locus_tag="CAALFM_C603450CA" /note="Mitochondrial leucyl-tRNA synthetase" /codon_start=1 /transl_table=12 /product="leucine--tRNA ligase" /protein_id="XP_718047.2" /db_xref="CGD:CAL0000195709" /db_xref="GeneID:3640275" /translation="MFPYPSGVLHIGHLRVYTISDVVARYKRSKGFNVIHPMGWDAFG LPAENAAVERNINPSEWTETNIAKMKNQMETFLADFDWQREVNTSSPEYYKWTQKIFL MLFERGLAYRKAAEINWDPVDNTVLANEQVDAEGRSWRSGAIVEKRNLEQWFIGITKY AKELNRDLKNLPDWPEKVKTMQKNWIGESNGVEINIPVNFPGLEHVTVFTSRPDTLFS MQFVALALNHPIVEAAAREDQELAAFIESAKSIDDPTSKAGYMLKNIKASIPIDVDNN IKKSFDIPVFTAPYVLGNYGHGAVMGCPGHDERDFDFWKLNGPRGVPAIQIITPKKQN AKDDYPYTLKKGTLEDSSVLTHGLNDIGEYKGKTIEKATQMITDCLKSHSLGDYTTQF KIRDWLISRQRYWGAPIPIVHCHDCGPVAVPDKDLPVMLPGVKGKNFGKGNPLGNIEE FVNCKCPSCGKDARRETDTMDTFMDSSWYFFRYLDSKNENLPIGPEASKQMPVDLYVG GVEHAILHLLYSRFIAKFLSDCGLWDGEPHHKEPFKKLVTQGMVHGKTFSDPITGKFL IPDELDFTDPANPLIKTTGKTPVVTFEKMSKSKHNGADPGEFIERYGADVIRAHLLFS APVSDTLNWQEEQISGTDRWLRRVIQLGDSITEIPKDQFKTEASGSSQTFQNVTLNKV HYDSIEFNSQELELYNTIQGYVQSIASSIEVKFSLNTIVSDLMKMTNTISEAIKTTNT YNQDLIFDSYQKLLICMSPVTPATAEECWERFALNQGKPAPKSIFYEKFPTDVPIESN LTMYNIFINGKHRGTMEAPKSFAKESETEIVKQISGAEKFNDLITGPVKKVIAKPSMI SIVFK" misc_feature 1..2583 /gene="NAM2" /locus_tag="CAALFM_C603450CA" /note="Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Region: LeuS; COG0495" /db_xref="CDD:440261" ORIGIN 1 atgttcccat acccttctgg tgtacttcat attggtcatc ttcgagtata taccatcagc 61 gatgtagtgg cacgatataa acgatccaaa ggttttaatg ttattcatcc tatgggatgg 121 gatgcctttg gattacctgc agaaaatgct gctgtagaaa gaaatatcaa tccttcagaa 181 tggactgaga caaatattgc taaaatgaaa aatcaaatgg agactttttt agccgatttc 241 gattggcaac gtgaagtgaa taccagttca ccagaatatt ataaatggac tcaaaagata 301 ttcttaatgt tgtttgaacg aggattggca tataggaaag cagcagaaat aaactgggat 361 cctgttgata acaccgtcct tgctaatgaa caagtagatg ctgaaggaag atcatggaga 421 agtggagcca ttgttgaaaa acggaattta gaacaatggt ttattggaat cactaaatac 481 gctaaagaat tgaatcgtga tttgaagaac ttacctgatt ggcccgaaaa agttaaaact 541 atgcaaaaga attggattgg cgaatctaat ggggttgaga ttaatattcc agtgaacttc 601 cctgggttag aacatgtaac ggtattcact tctcgtccag atacattatt tagtatgcaa 661 tttgtagcat tggcattgaa tcatcccatc gtggaagcag cagcaaggga agatcaagaa 721 ttagcagcat ttattgaatc tgccaaatca atcgatgatc caacatcgaa agcaggttac 781 atgttgaaaa atataaaggc atctattcca atcgatgttg ataacaatat taagaaatca 841 tttgatatac cagtttttac tgcaccatat gtgttaggga actatggaca tggggcagtt 901 atgggatgtc ccggacatga tgaaagagat tttgattttt ggaaattgaa tggtccaagg 961 ggtgtaccgg caattcaaat cattactccc aaaaaacaaa atgcaaaaga cgattatcca 1021 tatactttga aaaagggcac attagaggac tcatcagtat taactcatgg attgaatgat 1081 attggagaat ataagggtaa aacaattgaa aaagcgaccc aaatgattac tgactgttta 1141 aagtcccatt cattaggtga ttatactaca caatttaaaa tcagagattg gcttatcagt 1201 agacaaagat actggggtgc cccgattcca attgttcatt gtcacgattg tggacccgtg 1261 gcagtcccag ataaagattt acccgtaatg ttgccaggtg tcaagggtaa aaattttggc 1321 aaggggaacc cattagggaa tattgaagaa tttgtcaact gtaaatgtcc atcttgtggc 1381 aaagatgcta gaagagaaac tgatacaatg gatacattta tggattcctc gtggtacttt 1441 ttccgatact tggattcaaa gaatgaaaat ttacctattg gacctgaagc cagtaaacaa 1501 atgccagtag acttatatgt gggaggcgtt gaacatgcaa ttttgcattt attgtattct 1561 agatttattg ctaaattcct tagtgattgt ggattgtggg atggtgagcc tcatcacaag 1621 gaacctttca agaagttagt cactcaagga atggttcatg gtaaaacatt tagtgatcct 1681 ataactggga aattcttaat acctgacgaa cttgatttta ctgatcctgc caatccactt 1741 atcaaaacca ctggtaagac acctgtagtt acttttgaaa aaatgtcaaa atctaagcat 1801 aatggcgctg atcctggtga atttattgaa aggtatggtg ctgatgtcat cagagcccat 1861 ttgttattcc tggctccagt ttccgacacc ctcaattggc aagaagaaca gatttccggt 1921 acagatagat ggttgagacg tgtgattcaa ttgggtgatt ccataactga aattccaaaa 1981 gatcaattca agactgaagc ttcaggttca ctgcagactt tccaaaatgt taccttaaac 2041 aaagtacact atgattctat tgaattcaac agtcaagaac tcgaacttta taatactata 2101 caaggctacg ttcaatctat tgcttcctct attgaagtta agttttcact caataccatt 2161 gtgtcagatt tgatgaagat gacaaatact ataagtgaag ccattaaaac taccaacact 2221 tacaatcaag atttgatttt cgatagctat caaaaattat tgatttgtat gtctccagtt 2281 acacctgcaa ctgctgaaga atgttgggaa agatttgccc ttaaccaagg aaaaccagca 2341 ccaaaatcca tattctatga aaaatttcca actgatgttc ctattgaatc caatttgacc 2401 atgtataata tatttataaa tggtaaacat agaggaacaa tggaagcacc taaatcattt 2461 gccaaagaat ctgaaactga aatcgtgaaa caaatctcag gtgctgaaaa gttcaatgat 2521 ctcataactg gtcctgttaa aaaagtgatt gcaaaaccta gtatgataag tatagtcttt 2581 aaatag