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LOCUS XM_712952 4803 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_712952 VERSION XM_712952.2 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 4803) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 4803) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 4803) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 4803) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 4803) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 4803) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). On Dec 8, 2016 this sequence version replaced XM_712952.1. ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..4803 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>4803 /locus_tag="CAALFM_C603430CA" /db_xref="GeneID:3640273" CDS 1..4803 /locus_tag="CAALFM_C603430CA" /note="Has domain(s) with predicted catalytic activity and role in metabolic process" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_718045.1" /db_xref="CGD:CAL0000184041" /db_xref="GeneID:3640273" /translation="MSHSNNNINLKVPGNSLSGSNSNHGSSSSDRHNNRHRSVSAASL NPTTGTLITGELNETDPSTNITPDIGGTSGVGGDIPPDMAILLQKLDEDFLVNKVIDQ WTFINRREEIMQSINRLHQKQNDDLLNLDPLKLQMPLNPRMSTGDFSKISPDNLIDIL TYRANTYKSELAFIVLDAKGKEVSSISWEKLYLKAVKVAYEIQHKLTMKNSDSVVLLY KDGEVTEFVVALFGCFMAGVTAIPIHQDISLTEVLNIINLTSTKLLLYSETVAKELDR LSVQNSRINWPSKLLRWRTTDLGSARKSEVSHWNAKQQKLKKDNKTSSEQNTNLAYVE FSRSPVGELRGIALSHRTIFHQMHCLDLALSSLPNSGGGLQRSYKQYRADKKVVLATL DIRFSIGIILGVLFTVYSGNVHIWAPQKVMEIQGLYANLISKWRASLLLADYFGLKRV TYDYQQSPSATRYFSKTQRVDLSSVKWALVNALTIDGEFMEILAERYLRPLGCQHPEN AIIPMLTLSEYGGMVISLRDWIGGKEKLGMSMKDDDSNDLSSVLIDKEALSRNIVKIV EINPSANDDIGHDLLRVDAFGYPLPDATLAVVNPESSVLANKDELGEIWIDSPCLSGG FYGLRKESKSIFHAKCRGSNGQLDMDFLRTGLLGFTFNGKVYVLGLYEDRIRQRVSWI DQALYQKLHRDLVIGNGSRYHYSSHLLATLASEVKQIYDCTIFDIFIGNEYLPVAIVE AEVIRKQVADETAGAEGGNAKASESVHVSGVPLNEPVLNAIAQKCFDTLYKRHFLRLY CVVVVDCDTLPKLLRSGGREIANMLCKKKFLEGSLKADFVKFFIRKSISMIPHGEDVI GGIWSPYVSELRSKALANFPDQYSTIDYREKSINDKTGAPLTDFKTIVDILKFRVAKS GDSIAFQNVDNNSKSKPLTWKKLENRAYAVCQYLIEKANIKAGQYVILMYSLSEEFVI AVYACLMCGIIAVPMLPFDSNRIGEDFPAFVGVIRDFDISEILVNDEVEKFLKNGPIA DSLKKITHKRVKSLKIKNTVKLTKVSNMASLNSKIASYQAEVNFRDENTTALVWLNFT SDHYRVGATLSNKNIIGVCKVFKETCNLSSQSAIIGCVRHTSGIGFLQACLLGVFLGT TTYLSSPVNYAENPLSFFLLLARHKVKDVFVTEQMLKYAAIKFTPKGFNLSNLKNMMI STENRVEIDLLRKIAKVFSSTKLSAASMSTVYNHYFNPMISSRSYMTVAPVDLYLDPI ALRQGYVSVVNQAEVPNALHIQDSGMVPVCTEIAIVNPETRKICKEGEFGEIWVCSEA NLTAFTNGPKGPVDHFAQTQFRGVIADGNPDVTYLRTGDLGFLYNVSITKNKSSNSNG GASGGGGGGGEADGEITTFQPLFVLGKIADTFEVMGLHHFPIDIENTIESCHSDIYRN GSCIFKCGDYTIVVCESKRTKYFASLVPLIINTILSKHHLVIDIVAFIKKGEFPISRL GTKQRARIVDAWVQGVIPISASYGVNYGENSMIKLVEEIDIVTRDDPITGLKNPALSY YDDNDDQGDVFSDNRETLKLNDDYNYASIGQKAEFSLGNYSNSIVSED" misc_feature 514..2502 /locus_tag="CAALFM_C603430CA" /note="This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate...; Region: Adenylate forming domain, Class I superfamily; cl17068" /db_xref="CDD:473059" misc_feature order(997..999,1006..1023,1027..1032) /locus_tag="CAALFM_C603430CA" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341228" misc_feature order(1006..1008,1441..1446,1504..1521,1966..1968, 2032..2034,2041..2043,2104..2106,2452..2454) /locus_tag="CAALFM_C603430CA" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341228" misc_feature order(1006..1008,1177..1182,1339..1341,1345..1350, 1357..1359,1441..1446,1504..1521,1966..1968,2032..2034, 2041..2043,2086..2091,2101..2106,2386..2388) /locus_tag="CAALFM_C603430CA" /note="active site" /db_xref="CDD:341228" misc_feature order(1177..1179,1345..1350,1357..1359,1441..1443, 2086..2091,2101..2103,2314..2316,2386..2388) /locus_tag="CAALFM_C603430CA" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341228" misc_feature 2776..4548 /locus_tag="CAALFM_C603430CA" /note="This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate...; Region: Adenylate forming domain, Class I superfamily; cl17068" /db_xref="CDD:473059" misc_feature order(3244..3246,3256..3273,3277..3282) /locus_tag="CAALFM_C603430CA" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341228" misc_feature order(3256..3258,3613..3618,3667..3684,4075..4077, 4204..4206,4213..4215,4246..4248,4486..4488) /locus_tag="CAALFM_C603430CA" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341228" misc_feature order(3256..3258,3379..3384,3532..3534,3538..3543, 3550..3552,3613..3618,3667..3684,4075..4077,4204..4206, 4213..4215,4237..4248,4429..4431) /locus_tag="CAALFM_C603430CA" /note="active site" /db_xref="CDD:341228" misc_feature order(3379..3381,3538..3543,3550..3552,3613..3615, 4237..4245,4390..4392,4429..4431) /locus_tag="CAALFM_C603430CA" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341228" ORIGIN 1 atgtcccatt caaataataa tattaattta aaggtgcctg gtaatagttt atcaggttcc 61 aattccaatc atggctcatc ctcttcagac cgtcataata ataggcacag atcagtatct 121 gctgcaagtt taaatccaac cacaggaact ttaataactg gtgaattaaa tgaaaccgat 181 ccgtcaacta atatcactcc agatataggt ggtacttctg gtgttggtgg tgatatacca 241 ccagatatgg caatattgtt acaaaaatta gatgaagatt tcttagtgaa caaagtgatt 301 gatcaatgga cttttatcaa tagaagagaa gaaattatgc aatcaataaa tcggttacat 361 caaaagcaaa atgatgattt gctcaatttg gatcccttaa aattacagat gcctttaaat 421 ccaaggatgt caactggaga tttcctgaaa attagtcccg acaatttgat cgacatatta 481 acctatagag cgaatacata caaatcagaa ttagcattta tagtgcttga tgcaaaaggc 541 aaagaagtta gttcgatcag ttgggagaaa ttatatttga aagctgtcaa agttgcctat 601 gaaattcaac ataaattgac tatgaagaat agtgacagtg ttgtcttgtt gtataaagat 661 ggagaagtca ctgaatttgt ggtagccctt tttggttgtt ttatggctgg ggtaacagct 721 attccaatcc atcaagatat ttctttaacg gaagttttga atatcatcaa tttaacatca 781 acaaaattat tactttattc ggaaaccgtg gcgaaagaat tggatagatt aagtgttcag 841 aatctgagaa tcaattggcc atcgaaacta ttaagatgga gaacaacgga tttaggatcc 901 gctagaaaat ccgaagtgtc gcactggaat gccaaacaac aaaagttaaa gaaggacaac 961 aaaacctcaa gtgaacagaa taccaattta gcctatgtcg agttctcacg atctcccgtg 1021 ggtgagttga gaggaattgc cttaagtcat cgaactattt ttcatcagat gcattgtctt 1081 gatttggctc ttctgtcatt accaaactct ggtggtggtc ttcagagaag ttataaacaa 1141 tatcgtgcag ataaaaaagt ggtgttggct actttggata ttcggttttc cattggtata 1201 atattggggg ttttattcac agtatattct ggtaatgtac atatatgggc acctcaaaaa 1261 gttatggaaa tacaagggtt atatgcaaat ttgatttcta aatggagagc ttctttatta 1321 ttggccgatt actttgggtt gaaaagagtc acttatgact accaacaatc acccagtgcc 1381 acaagatatt tttccaaaac ccaacgagtg gatttatcgt cagtgaaatg ggcgttggtg 1441 aatgccctta caatagatgg agaatttatg gaaattttag cagaaagata tttgcgtccc 1501 ttggggtgtc aacatccgga aaatgctatt atccccatgt taaccttgag tgagtatggg 1561 ggtatggtca tctctcttcg agattggatt ggtggtaaag agaaattggg tatgagcatg 1621 aaagatgatg actcgaatga tttatcttca gttttaattg ataaggaagc tttatcaaga 1681 aacattgtca agattgttga gatcaatcct tctgctaatg acgatattgg tcatgatctt 1741 ttacgtgttg acgcttttgg gtatccttta ccggatgcaa cgttagcagt ggtaaaccca 1801 gaactgtcag tacttgccaa taaagacgaa ttaggagaaa tctggattga tagtccatgt 1861 ctttccggtg gattttatgg tttacgtaag gaatcgaagc tgattttcca tgccaaatgt 1921 cgtggatcaa atggacaatt ggatatggat tttttgagaa caggcttatt ggggttcact 1981 tttaatggga aagtttatgt tctcggattg tatgaagata gaatcagaca aagagtgagt 2041 tggattgatc aagcattgta tcaaaaacta catcgtgatc ttgttatagg taatggctcc 2101 aggtatcatt attcttctca tttgcttgca acattggcat cagaagttaa acaaatttat 2161 gattgtacga ttttcgatat tttcattggt aatgaatatt taccagtagc tattgttgaa 2221 gctgaagtta ttcggaaaca agttgccgac gaaactgctg gtgctgaagg aggtaatgcc 2281 aaggcgagtg aatctgtcca tgttagtgga gtaccactta atgaacccgt cttgaatgct 2341 attgctcaaa aatgttttga tacattatac aaaagacatt ttttgagatt atattgtgtt 2401 gtggttgtcg attgtgatac cttgccgaaa ttactaagaa gtggtggtag agaaatcgcc 2461 aatatgttgt gcaaaaagaa atttcttgaa ggttcattga aagctgattt tgtaaagttt 2521 ttcattagaa aatccattag tatgatcccg catggtgaag atgtaattgg tgggatttgg 2581 tctccgtatg tttccgaatt aagatctaaa gcacttgcca atttcccaga tcaatattct 2641 acaattgatt atcgtgaaaa atcaattaat gataaaactg gcgctccctt gactgatttc 2701 aaaaccattg ttgatatttt gaaatttaga gtagctaaat ctggtgattc cattgcattt 2761 caaaatgttg acaacaattc gaaaagtaaa ccattaactt ggaagaaatt agagaatcgt 2821 gcttatgctg tatgtcaata tttaattgaa aaagccaata ttaaggcagg acaatatgtt 2881 atattaatgt attcattatc agaagaattt gtcattgcgg tatatgcatg tttaatgtgt 2941 ggaatcattg ctgttccgat gttacccttt gattccaata gaattggtga agatttccca 3001 gcatttgttg gtgtcattag agattttgat atatcagaaa tcttagttaa tgatgaagtc 3061 gagaaatttt tgaaaaatgg gcctatagct gattcattaa aaaaaattac tcataaacga 3121 gtgaaatctt tgaaaattaa aaataccgtt aaattaacta aagtttctaa tatggcgtca 3181 ttaaattcaa agattgctag ttatcaagca gaagtgaatt tccgtgatga aaacactacc 3241 gctttagtat ggttaaattt cacttctgat cattatagag tgggggcaac tttgagtaat 3301 aaaaacatta ttggggtgtg taaagtattc aaagaaactt gtaatttaag ttctcaatca 3361 gcaattatag gttgtgttag acatacttct gggattgggt ttttacaagc ttgtttattg 3421 ggtgtgtttt tgggtacaac cacttattta agttcaccag tcaattacgc tgaaaatcca 3481 ttatcattct ttttattact tgctagacac aaagtgaagg atgtatttgt tactgaacaa 3541 atgcttaaat atgctgccat taaattcacc cccaaggggt tcaatttatc gaatttgaaa 3601 aatatgatga ttagtactga aaatagagtt gaaattgatt tattaagaaa aattgctaaa 3661 gtgttcctgt ccaccaaact tagtgcagcg tcaatgtcaa cggtttataa tcattatttc 3721 aacccaatga tttcttcaag gtcgtatatg acggtggcac cggttgatct ttatttagat 3781 cctattgctc ttcgacaagg ttatgtatca gtggtgaatc aagctgaagt tcctaatgca 3841 ttacatattc aggattctgg tatggtacct gtttgtaccg aaattgccat tgttaatcca 3901 gaaacaagga aaatatgtaa agaaggagaa tttggagaaa tttgggtatg ttctgaagcc 3961 aaccttactg cttttactaa cggaccaaag ggacccgtgg atcattttgc tcaaactcag 4021 tttagaggtg ttattgctga tggtaatcct gatgttacat atttaagaac tggtgattta 4081 ggatttttgt ataatgtttc aatcaccaag aataaaagta gcaacagcaa tggtggtgcc 4141 agtggcggtg gcggtggcgg tggcgaggct gatggagaaa ttacaacatt ccaaccactt 4201 tttgttttgg gaaaaattgc tgatacattt gaagttatgg gattacatca ttttcctatt 4261 gatattgaaa acactattga atcatgtcat tcagatattt atcgaaatgg atcctgtata 4321 tttaaatgtg gtgattatac tattgttgtt tgtgaatcca aacggacaaa atattttgct 4381 tcattggtac ctttaatcat taataccatt ttaagtaaac atcatttagt gattgatatt 4441 gttgccttta ttaaaaaggg tgaattccct atatcaagat taggtactaa acaacgagca 4501 agaattgttg atgcttgggt tcaaggagtt attccaatta gtgcatcata tggagttaat 4561 tatggggaaa atagtatgat taaattagtg gaagaaattg atattgttac tagagatgat 4621 ccaattactg gattaaagaa tccagcatta tcttattatg atgataatga tgatcaaggt 4681 gatgttttca gtgataatag agaaacatta aaacttaatg atgattataa ttatgcatca 4741 attggtcaaa aagctgaatt ttctttagga aattatagta atagtattgt ttctgaagat 4801 tga